Non-Coding RNA Search

Ss1.1-rspl32_p19.5

Sequence:


               
               CTTTTTCCTTTTAGGAAGCTGCAGTAAAAGAAGATGAAGAAGAAGTTTCTGACAAAGGCA
GTGACTCTGAGGAAGAAGAAACCAATAGAGACTCTCAAAGTGAAAAAGATGATGGTAGTG
ACAGAGACTCTGATAGAGAGCAAGATGAAAAGCAAAACAAGGATGATGAAGCAGTAAGAC
TTATAGGTTTAAATAATTGGAATTATACCTCTGAGGGTAGTTTTGGGTTTGTTGATTTTT
CATTTGCTTGCTTACTTTTTTTGGCTTCTCTTAAACAATACCAGTATATTTTATAATCTT
ATATTACTTTCTAAGAATGTTTTTGAGGGATGGTAGTCATTAATTGTAATGAAAAATTGT
TTCTGACAAGGTTTGGAAATCCTAATTTTCTTAAATCTTAAATTGCTAGATAGAGTAGGA
CCTGAGCCTGTGGTGAAGTTAGTTTGGTTTCTTAAGGCAATTTTCAGTGTTAGAGATGAC
TCTGGAAATATGAATAAGGAAAGGTGGGTTACGAAATAGGTAGCAGTTACTTGGAAGAGG
ATACCAGAAATTGAGGGAAATGTTGAGGGTAAAGAAACATTACTATAGGCTCTAATGTCA
AGAGGTTGGTTAAGGAAAAAGTTTACAGAATGCCACCTTGTTTCAAGAGGTATGTAAGAC
ATTAAGGAAAGGAGTCACTGAGGAACTAAGATTGTGAGGGTATAGGGAATAGGAAAAAAA
TCTCATGACATGGCATTAAGTTGCACATGATTTATAAGAAGGCTGTAGAAAAGAATGTTT
CATGGGCAAATAGGAGTCCTTAAAGACTCACTGCAGATGAACATGGAAGTTCCCAGGCTA
GGGTTCACATTGGAGCTGTAGCTGCTGGCCTACACCACAGCCACAGCAATGCGGGATCCA
AGCCACGTCTGCAACCTACACCACAGCTCACTGCAACGCCAGATCCTTAACCCACTGAGG
AGATCCAGGGATCAAACCCGTATCCTTATGGATACTAGTTGGGTTCAT------------
------------------------ATTTTCTTTATGTTTGTGGTATCCTTCTTGACTGGG
TCATAGATTTAAAAGTAGCCTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTTTCCTTTTAGGAAGCTGCAGTAAAAGAAGATGAAGAAGAAGTTTCTGACAAAGGCA
GTGACTCTGAGGAAGAAGAAACCAATAGAGACTCTCAAAGTGAAAAAGATGATGGTAGTG
ACAGAGACTCTGATAGAGAGCAAGATGAAAAGCAAAACAAGGATGATGAAGCAGTAAGAC
TTATAGGTTTAAATAATTGGAATTATACCTCTGAGGGTAGTTTTGGGTTTGTTGATTTTT
CATTTGCTTGCTTACTTTTTTTGGCTTCTCTTAAACAATACCAGTATATTTTATAATCTT
ATATTACTTTCTAAGAATGTTTTTGAGGGATGGTAGTCATTAATTGTAATGAAAAATTGT
TTCTGACAAGGTTTGGAAATCCTAATTTTCTTAAATCTTAAATTGCTAGATAGAGTAGGA
CCTGAGCCTGTGGTGAAGTTAGTTTGGTTTCTTAAGGCAATTTTCAGTGTTAGAGATGAC
TCTGGAAATATGAATAAGGAAAGGTGGGTTACGAAATAGGTAGCAGTTACTTGGAAGAGG
ATACCAGAAATTGAGGGAAATGTTGAGGGTAAAGAAACATTACTATAGGCTCTAATGTCA
AGAGGTTGGTTAAGGAAAAAGTTTACAGAATGCCACCTTGTTTCAAGAGGTATGTAAGAC
ATTAAGGAAAGGAGTCACTGAGGAACTAAGATTGTGAGGGTATAGGGAATAGGAAAAAAA
TCTCATGACATGGCATTAAGTTGCACATGATTTATAAGAAGGCTGTAGAAAAGAATGTTT
CATGGGCAAATAGGAGTCCTTAAAGACTCACTGCAGATGAACATGGAAGTTCCCAGGCTA
GGGTTCACATTGGAGCTGTAGCTGCTGGCCTACACCACAGCCACAGCAATGCGGGATCCA
AGCCACGTCTGCAACCTACACCACAGCTCACTGCAACGCCAGATCCTTAACCCACTGAGG
AGATCCAGGGATCAAACCCGTATCCTTATGGATACTAGTTGGGTTCAT------------
------------------------ATTTTCTTTATGTTTGTGGTATCCTTCTTGACTGGG
TCATAGATTTAAAAGTAGCCTTGT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-281, gnl|bosTau2|chr25 (25871548-25871268)
               

               
               1-281, gnl|Hg17|chr6 (108311057-108310787)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-281, gnl|bosTau2|chr25 (25871548-25871268)
               

               
               1-281, gnl|Hg17|chr6 (108311057-108310787)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	1-281, gnl\|bosTau2\|chr25 (25871548-25871268)
	1-281, gnl\|Hg17\|chr6 (108311057-108310787)