Non-Coding RNA Search

Ss1.1-rspl35_g14.5

Sequence:


               
               GTTTTATTTTGATGAATCCTGGTCACCTACTTTGGCAGTAGGGTGACAGGTGAAGCCATA
GACATTTGGTTATTTGTGAAGAGGATTCCCTACCCAAATCTTTGATACTTGTATAAGGGT
TTTGTTTTAAAGCATCTTAATCTTTTCAGATACTGACACCAAATGCCTTTAAGTGGCTTA
TAGATGCTTAACTCAGTATTCTTCCCTCAGTTTGGGTGGAGCCTGTTTCATCCTTTTCTG
AGTAACTTCTCAGATTCCAGAGCTGGTCAGGTCCTTCCAGCTTGCAGCAGAAGACTCATT
TTCCTTAGTGTAGTTTTCTTTGTAAAAGAATATCAAGTTAAAAGTGAGTTTCAACACTCA
CATCCATTCTGTGTATTGTGAAACTATAGCTTCGGTAGTTCTTAAACTATTACACTTTTT
TGTATTTCAGTTCAGCACCACTCCATGTGGACTGTGATATTGAAGAATTAACTGGGCTGG
GTGAGAATCACCTTTTTAAATTATCATCTAGGCACTTACTAATCATTGAAGTAGTTCAAA
TGCATTCCAGTAAATGAAGTGCCCCCGCACTGTGCTTAGAAGTAGTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTATTTTGATGAATCCTGGTCACCTACTTTGGCAGTAGGGTGACAGGTGAAGCCATA
GACATTTGGTTATTTGTGAAGAGGATTCCCTACCCAAATCTTTGATACTTGTATAAGGGT
TTTGTTTTAAAGCATCTTAATCTTTTCAGATACTGACACCAAATGCCTTTAAGTGGCTTA
TAGATGCTTAACTCAGTATTCTTCCCTCAGTTTGGGTGGAGCCTGTTTCATCCTTTTCTG
AGTAACTTCTCAGATTCCAGAGCTGGTCAGGTCCTTCCAGCTTGCAGCAGAAGACTCATT
TTCCTTAGTGTAGTTTTCTTTGTAAAAGAATATCAAGTTAAAAGTGAGTTTCAACACTCA
CATCCATTCTGTGTATTGTGAAACTATAGCTTCGGTAGTTCTTAAACTATTACACTTTTT
TGTATTTCAGTTCAGCACCACTCCATGTGGACTGTGATATTGAAGAATTAACTGGGCTGG
GTGAGAATCACCTTTTTAAATTATCATCTAGGCACTTACTAATCATTGAAGTAGTTCAAA
TGCATTCCAGTAAATGAAGTGCCCCCGCACTGTGCTTAGAAGTAGTAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-561, gnl|bosTau2|chr28 (562999-563555)
               

               
               7-561, gnl|Hg17|chr1 (225767566-225767002)
               

               
               7-561, gnl|Mm7|chr8 (122429342-122428820)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-561, gnl|bosTau2|chr28 (562999-563555)
               

               
               7-561, gnl|Hg17|chr1 (225767566-225767002)
               

               
               7-561, gnl|Mm7|chr8 (122429342-122428820)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               spc (0.113366)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               spc (0.113366)

	7-561, gnl\|bosTau2\|chr28 (562999-563555)
	7-561, gnl\|Hg17\|chr1 (225767566-225767002)
	7-561, gnl\|Mm7\|chr8 (122429342-122428820)