Non-Coding RNA Search

Ss1.1-rspl35_j3.5

Sequence:


               
               CTTAGTGTAAATAACCCCAGTGTGCCTTCATTCATTCACTCATGCATTCATTCAGTGTGT
GCCTCTTTCCATTAGGGCACATAATCACAAAATGACTGTGTATGACTTGATCACTCACAT
GGCTCTGATGTCACTCAGAGCAGGCAATTAGATTTTTCCCAAAGGCCGGATTTGGGGGTC
AGGAGGGCAGACTGATGGAGCATTGACAAGGACTCTGATGTCAGCTTTCAACTATGCAGT
AGCATCGTGAAGTGATATGACCATCCCCCACCTATAAACACCCCCCCTCCTCCACACACT
CACCCCCCACAGGCCCAGCAGCAGATTTGGAGACACAGCTACTCTCTTCCATTCTCCAGG
GCAGGGAACAGCCAGCCAGACCCAGAGGCCCTGCAGGAGGCCAGGTGCCAAGAATGATGG
CCTCACTGCTTTCACTCCCGTGCAAACAGGCAAGCTTCTTCCTGGCCTCCCTGTTCATCT
CTGGATAAAGCCAAGAAAACTGGGGTAGGGAGATTAAATGGAACCTAGCTCCCCCATGTA
CTTCAGCAGGATTGTCAGAAACCAGACCTGTAGTGTGTGTGGCCTTGGAAGAGTCATTGC
ACTGCTGTGAGCCTCTGTTTTCTCACCTCTATGATGAAGCCAATAATCTCAGCCCTTTGC
CCTCATAAAGTGATTGTGAAGATTAAATGAGGTCGTATTTGTGCAAATGAAAAGGATGCT
AACAGCTAATGTTCTTTGGGTACATCCCATGCACTATTTTAGTTTCCATTTTATAAAGAA
AGACCTAAGGCTCAGAGAAGTTAAGTGCCTTGCTCAGAGTCACACAGTAAATAAGTGCTG
GGGCATGGTTATTTGTGGCCTGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTAGTGTAAATAACCCCAGTGTGCCTTCATTCATTCACTCATGCATTCATTCAGTGTGT
GCCTCTTTCCATTAGGGCACATAATCACAAAATGACTGTGTATGACTTGATCACTCACAT
GGCTCTGATGTCACTCAGAGCAGGCAATTAGATTTTTCCCAAAGGCCGGATTTGGGGGTC
AGGAGGGCAGACTGATGGAGCATTGACAAGGACTCTGATGTCAGCTTTCAACTATGCAGT
AGCATCGTGAAGTGATATGACCATCCCCCACCTATAAACACCCCCCCTCCTCCACACACT
CACCCCCCACAGGCCCAGCAGCAGATTTGGAGACACAGCTACTCTCTTCCATTCTCCAGG
GCAGGGAACAGCCAGCCAGACCCAGAGGCCCTGCAGGAGGCCAGGTGCCAAGAATGATGG
CCTCACTGCTTTCACTCCCGTGCAAACAGGCAAGCTTCTTCCTGGCCTCCCTGTTCATCT
CTGGATAAAGCCAAGAAAACTGGGGTAGGGAGATTAAATGGAACCTAGCTCCCCCATGTA
CTTCAGCAGGATTGTCAGAAACCAGACCTGTAGTGTGTGTGGCCTTGGAAGAGTCATTGC
ACTGCTGTGAGCCTCTGTTTTCTCACCTCTATGATGAAGCCAATAATCTCAGCCCTTTGC
CCTCATAAAGTGATTGTGAAGATTAAATGAGGTCGTATTTGTGCAAATGAAAAGGATGCT
AACAGCTAATGTTCTTTGGGTACATCCCATGCACTATTTTAGTTTCCATTTTATAAAGAA
AGACCTAAGGCTCAGAGAAGTTAAGTGCCTTGCTCAGAGTCACACAGTAAATAAGTGCTG
GGGCATGGTTATTTGTGGCCTGTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-837, gnl|bosTau2|chr29 (19202425-19201621)
               

               
               1-837, gnl|Hg17|chr11 (19346000-19346859)
               

               
               1-837, gnl|Mm7|chr7 (45203251-45204049)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-837, gnl|bosTau2|chr29 (19202425-19201621)
               

               
               1-837, gnl|Hg17|chr11 (19346000-19346859)
               

               
               1-837, gnl|Mm7|chr7 (45203251-45204049)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	1-837, gnl\|bosTau2\|chr29 (19202425-19201621)
	1-837, gnl\|Hg17\|chr11 (19346000-19346859)
	1-837, gnl\|Mm7\|chr7 (45203251-45204049)