Non-Coding RNA Search

Ss1.1-rspl35_m18.5

Sequence:


               
               GAATATGGAAAACTGGGTGGAGCGGTTTCTTTTGGCTCACAATTATCCTAGAGTCAGGAC
TTCTGCAGCTTATCTTCTGGTGTCCCTTATACCAGGGGGGTAAACCCAGCGCTAATTCCA
ACTCTGCAAGAGCTTTTAAGCAAATGCAGGACTTGTTTGCAGCAGAGAAACTCACTCCAA
GAGCAAGAAGCCAAAGAAAGAAAAACTAAAGATGATGAAGGGGCGACTCCTATTAAAAGA
AGGCGAGTTAGCAGTGATGAGGAGCACACTGTAGAGAGCTGCATCAGTGAGATGAAAACA
GAAACCAGGGAGGTCCTGACCCCGACTAGCACTTCAGACAATGAGACAAGAGACTCCTCA
ATTATCGATCCGGGAACTGAGCAAGATCTTCCTTCCCCTGAAAATAGTTCTGTCAAAGAA
TACCGAATGGAAGTTCCATCTTCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATATGGAAAACTGGGTGGAGCGGTTTCTTTTGGCTCACAATTATCCTAGAGTCAGGAC
TTCTGCAGCTTATCTTCTGGTGTCCCTTATACCAGGGGGGTAAACCCAGCGCTAATTCCA
ACTCTGCAAGAGCTTTTAAGCAAATGCAGGACTTGTTTGCAGCAGAGAAACTCACTCCAA
GAGCAAGAAGCCAAAGAAAGAAAAACTAAAGATGATGAAGGGGCGACTCCTATTAAAAGA
AGGCGAGTTAGCAGTGATGAGGAGCACACTGTAGAGAGCTGCATCAGTGAGATGAAAACA
GAAACCAGGGAGGTCCTGACCCCGACTAGCACTTCAGACAATGAGACAAGAGACTCCTCA
ATTATCGATCCGGGAACTGAGCAAGATCTTCCTTCCCCTGAAAATAGTTCTGTCAAAGAA
TACCGAATGGAAGTTCCATCTTCG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               210-444, gnl|bosTau2|chr13 (58251976-58252210)
               

               
               210-444, gnl|Hg17|chr2 (61327497-61327263)
               

               
               210-444, gnl|Mm7|chr11 (23440588-23440822)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               210-444, gnl|bosTau2|chr13 (58251976-58252210)
               

               
               210-444, gnl|Hg17|chr2 (61327497-61327263)
               

               
               210-444, gnl|Mm7|chr11 (23440588-23440822)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               eru (0.120048)

	210-444, gnl\|bosTau2\|chr13 (58251976-58252210)
	210-444, gnl\|Hg17\|chr2 (61327497-61327263)
	210-444, gnl\|Mm7\|chr11 (23440588-23440822)