Ss1.1-rspl35_o21.5
|
AGCTACGAAGGTGGGAGACTGGTATGCTTGTATATTTTGGAAAAAACTGCTGAAGATACC
AAAGAAAGGGCAGCTCTTCTACTGACAAACATAAGGAAATAATTTACCACCTACTTAGGA
TTAGAAGACCAGCTCATTCTCAGAGTCTTCTAAAACAAAATTAGAATGGATTGGGGAGAT
GAATATTCCCATAATTCTTTTGATCTACATTGTTTGTTAAATTCATTGCCTGGAGAGTTG
GAGTTTAAGCAGATCTTCAGTGACATTGATGAAAAGATAGAACAAAATGCTACAAGCATA
GAACATTGCATTAAAGAAATACAGTCTGAAGTTAACAAACAATGTCCAGATGTGCAGCTA
CAAACAACAACTGACTGTTTTGAATGGCTAAATAATTATAATTGTGATTCACTCAAGTCA
CCTTCCATTCCCCATGGAGATTTGATAAAGTTTCTCAAAACACTGGTAAAAAAAAAATTT
GTTTTACATTGGAATGGGGTGGGTGAAAATGGAATACAATTCTTTTAATTTCTCTGTGTA
AGTATTTATTTCATTGACCTTATTAGCCTGCCATATCTAGGGGTTGGGGTACTATTTTGT
TTTGTTTTTGTATCTTCAGTGGAATCCAGTAAGCTATTTGTTTTTATTTTTTACTGTGAT
TTTTTATAATGAAATGAAGTTTTATATTAAAGAGGTTAAACATTATAATTCTTGGGTGAT
TTGTGGTGTGATATATACCGTGTCAACATTACGAAATGTATTGAAATGTACCACAGTTGT
CTATCAGAAAAGTTGATATTTATTATATTTTGTGTCCCTTCATAACTACTCATTTTCTCT
GTGCTTATTATTAAACATAATAAAATTGTCATTGAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGCTACGAAGGTGGGAGACTGGTATGCTTGTATATTTTGGAAAAAACTGCTGAAGATACC
AAAGAAAGGGCAGCTCTTCTACTGACAAACATAAGGAAATAATTTACCACCTACTTAGGA
TTAGAAGACCAGCTCATTCTCAGAGTCTTCTAAAACAAAATTAGAATGGATTGGGGAGAT
GAATATTCCCATAATTCTTTTGATCTACATTGTTTGTTAAATTCATTGCCTGGAGAGTTG
GAGTTTAAGCAGATCTTCAGTGACATTGATGAAAAGATAGAACAAAATGCTACAAGCATA
GAACATTGCATTAAAGAAATACAGTCTGAAGTTAACAAACAATGTCCAGATGTGCAGCTA
CAAACAACAACTGACTGTTTTGAATGGCTAAATAATTATAATTGTGATTCACTCAAGTCA
CCTTCCATTCCCCATGGAGATTTGATAAAGTTTCTCAAAACACTGGTAAAAAAAAAATTT
GTTTTACATTGGAATGGGGTGGGTGAAAATGGAATACAATTCTTTTAATTTCTCTGTGTA
AGTATTTATTTCATTGACCTTATTAGCCTGCCATATCTAGGGGTTGGGGTACTATTTTGT
TTTGTTTTTGTATCTTCAGTGGAATCCAGTAAGCTATTTGTTTTTATTTTTTACTGTGAT
TTTTTATAATGAAATGAAGTTTTATATTAAAGAGGTTAAACATTATAATTCTTGGGTGAT
TTGTGGTGTGATATATACCGTGTCAACATTACGAAATGTATTGAAATGTACCACAGTTGT
CTATCAGAAAAGTTGATATTTATTATATTTTGTGTCCCTTCATAACTACTCATTTTCTCT
GTGCTTATTATTAAACATAATAAAATTGTCATTGAT
|
|
gi|12843304|dbj|BAB25933.1| |
Protein identifier
|
gi|12843304|dbj|BAB25933.1| |
|
476-450, , RaveNnA Score=20.59 |
PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)
|
476-450, , RaveNnA Score=20.59 |
|
21-164, gnl|bosTau2|chr7 (58425003-58424856) |
|
21-164, gnl|canFam2|chr3 (17775515-17775072) |
|
21-164, gnl|dasNov1|scaffold_82860 (6186-5739) |
|
21-164, gnl|echTel1|scaffold_185143 (6421-6026) |
|
21-164, gnl|hg17|chr5 (93943798-93944248) |
|
21-164, gnl|Hg17|chr5 (93944045-93943894) |
|
21-164, gnl|loxAfr1|scaffold_35019 (7558-7115) |
|
21-164, gnl|mm7|chr13 (74166990-74166661) |
|
21-164, gnl|monDom2|scaffold_20 (3672431-3671956) |
|
21-164, gnl|oryCun1|scaffold_201153 (114268-114703) |
|
21-164, gnl|panTro1|chr4 (21267140-21266691) |
|
21-164, gnl|rheMac2|chr6 (90807575-90808025) |
|
21-164, gnl|rn3|chr2 (4519348-4518953) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
21-164, gnl|bosTau2|chr7 (58425003-58424856) |
|
21-164, gnl|canFam2|chr3 (17775515-17775072) |
|
21-164, gnl|dasNov1|scaffold_82860 (6186-5739) |
|
21-164, gnl|echTel1|scaffold_185143 (6421-6026) |
|
21-164, gnl|hg17|chr5 (93943798-93944248) |
|
21-164, gnl|Hg17|chr5 (93944045-93943894) |
|
21-164, gnl|loxAfr1|scaffold_35019 (7558-7115) |
|
21-164, gnl|mm7|chr13 (74166990-74166661) |
|
21-164, gnl|monDom2|scaffold_20 (3672431-3671956) |
|
21-164, gnl|oryCun1|scaffold_201153 (114268-114703) |
|
21-164, gnl|panTro1|chr4 (21267140-21266691) |
|
21-164, gnl|rheMac2|chr6 (90807575-90808025) |
|
21-164, gnl|rn3|chr2 (4519348-4518953) |
|
fco (0.157208) |
|
spl (0.143184) |
|
fco (0.157208) |
|
spl (0.143184) |
