Non-Coding RNA Search

Ss1.1-rspl38_i4.5

Sequence:


               
               GGGGACAACAGCTCCTCCTGAGTGAATAAGCCAGTGGGCAAAGAGTCTGGACCCTGTTCA
GCCAAAATGACAGGCCTGCCAGTGAAGGAACCGCAAACCAAATCTTCCTCCTTGAAGAAA
GAGGCGCAGTGTCGACCCTGCTTCTCTGCTAGAGGCTTCAGTTGCCTTATGCTGAGTCAG
TCTGCACCCAGGATGTGGGACCTCCAGCACTGATTGATGCTGCTTCTCATTTCACTGCCT
GGAAGGTAAAACTTCCAGGCTAGAATCGCTCATTTGCATTTGGTCCAAGACTGAAATAGA
TTGAGGCCGTGATCATTATGCTTTTCTGCTCTGGTCAGAGCCGTTCTGATAGGTGTTTCA
GGGTCTTGGCCTGTGGAAAATGACGTCAGAATTAGTTTTTAACCTTTAAAATCAGGCCAA
TTATGATTCTGCTCCTTAAGGTAGAATTGGGAACCTTCGCTTGGGAAAAACATTTGGAAA
ACATTTGCAAAAGTTCCTCTAAAG------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------TGGTTTGTCTGCAGAGTTCCCGAATCCTCGAGCAGT
GGTCAGAGCCCAGTAACGAGGGAAGGAAGGACAGCCTTGTCCCCTGCCTGTCTTCCCAGC
CCCATTTTTGTTCTGTGCCAGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGACAACAGCTCCTCCTGAGTGAATAAGCCAGTGGGCAAAGAGTCTGGACCCTGTTCA
GCCAAAATGACAGGCCTGCCAGTGAAGGAACCGCAAACCAAATCTTCCTCCTTGAAGAAA
GAGGCGCAGTGTCGACCCTGCTTCTCTGCTAGAGGCTTCAGTTGCCTTATGCTGAGTCAG
TCTGCACCCAGGATGTGGGACCTCCAGCACTGATTGATGCTGCTTCTCATTTCACTGCCT
GGAAGGTAAAACTTCCAGGCTAGAATCGCTCATTTGCATTTGGTCCAAGACTGAAATAGA
TTGAGGCCGTGATCATTATGCTTTTCTGCTCTGGTCAGAGCCGTTCTGATAGGTGTTTCA
GGGTCTTGGCCTGTGGAAAATGACGTCAGAATTAGTTTTTAACCTTTAAAATCAGGCCAA
TTATGATTCTGCTCCTTAAGGTAGAATTGGGAACCTTCGCTTGGGAAAAACATTTGGAAA
ACATTTGCAAAAGTTCCTCTAAAG------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------TGGTTTGTCTGCAGAGTTCCCGAATCCTCGAGCAGT
GGTCAGAGCCCAGTAACGAGGGAAGGAAGGACAGCCTTGTCCCCTGCCTGTCTTCCCAGC
CCCATTTTTGTTCTGTGCCAGGCT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-624, gnl|bosTau2|chr16 (22038973-22038342)
               

               
               3-624, gnl|Hg17|chr1 (11281491-11282425)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-624, gnl|bosTau2|chr16 (22038973-22038342)
               

               
               3-624, gnl|Hg17|chr1 (11281491-11282425)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	3-624, gnl\|bosTau2\|chr16 (22038973-22038342)
	3-624, gnl\|Hg17\|chr1 (11281491-11282425)