Non-Coding RNA Search

Ss1.1-rssp04_e24.5

Sequence:


               
               TTTATTCTCTAGATCTGTTACAGACTTAGTTTTCTAACTCCTATTTGGGGAGCAGGTGTT
AATAATAACTTATTCCTAAAGTTTGATTTTTCTTATTTGTTGTTTCATGGTGTGAACCAG
TAGTGGGTACTTTGGGACATTATTTCAAGTGAGCAAACCCTGAATTCTTAGGTTTTATGC
TGCTATATATTGGAAATATCCATTCTAAGTGCCTTTTTTTGAGGAAAGAGAGTACCAGAT
CATAGTTCTCTTTACTTAAAGGTGGCCTCACACTAAGTGATGAACTCCTTTCTGTAGAAT
TACTCTCTCTGCTTTTGCCTTCTTTGTATCTGCACACATAATTCCTACTCTCCTTTGGTG
AACTATCAACAAAAAAATTGCAAGTGCAGTGTGTATATTTAAGGATTTCAGTATTAACAC
TTGAAATCACATTTTAAGAAGATTTCTGGTACTCGGTGTATTTGTAGCAGTAAATGCAGA
GTAATCCAGAGAAATGGAGCCATGAGCCCAATTCCAGAGAGGAAGGGGGAAAAGGAGAAA
AGGCCTGGGTGCAGAGTCTTACAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTATTCTCTAGATCTGTTACAGACTTAGTTTTCTAACTCCTATTTGGGGAGCAGGTGTT
AATAATAACTTATTCCTAAAGTTTGATTTTTCTTATTTGTTGTTTCATGGTGTGAACCAG
TAGTGGGTACTTTGGGACATTATTTCAAGTGAGCAAACCCTGAATTCTTAGGTTTTATGC
TGCTATATATTGGAAATATCCATTCTAAGTGCCTTTTTTTGAGGAAAGAGAGTACCAGAT
CATAGTTCTCTTTACTTAAAGGTGGCCTCACACTAAGTGATGAACTCCTTTCTGTAGAAT
TACTCTCTCTGCTTTTGCCTTCTTTGTATCTGCACACATAATTCCTACTCTCCTTTGGTG
AACTATCAACAAAAAAATTGCAAGTGCAGTGTGTATATTTAAGGATTTCAGTATTAACAC
TTGAAATCACATTTTAAGAAGATTTCTGGTACTCGGTGTATTTGTAGCAGTAAATGCAGA
GTAATCCAGAGAAATGGAGCCATGAGCCCAATTCCAGAGAGGAAGGGGGAAAAGGAGAAA
AGGCCTGGGTGCAGAGTCTTACAC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-564, gnl|bosTau2|chrX (24074298-24073733)
               

               
               1-564, gnl|Hg17|chrX (71583578-71583010)
               

               
               1-564, gnl|Mm7|chrX (97843107-97842611)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-564, gnl|bosTau2|chrX (24074298-24073733)
               

               
               1-564, gnl|Hg17|chrX (71583578-71583010)
               

               
               1-564, gnl|Mm7|chrX (97843107-97842611)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

Help | Less info


               
               sme (0.305437)
               

               
               tbr (0.154178)
               

               
               ssp (0.13552)
               

               
               clu (0.119646)
               

               
               ldo (0.0970026)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.305437)
               

               
               tbr (0.154178)
               

               
               ssp (0.13552)
               

               
               clu (0.119646)
               

               
               ldo (0.0970026)

	1-564, gnl\|bosTau2\|chrX (24074298-24073733)
	1-564, gnl\|Hg17\|chrX (71583578-71583010)
	1-564, gnl\|Mm7\|chrX (97843107-97842611)

	sme (0.305437)
	tbr (0.154178)
	ssp (0.13552)
	clu (0.119646)
	ldo (0.0970026)