Ss1.1-rssp04_g8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAACATGGCGCTGCTAGGCCGGGTTTTCGCCCCTGGACACGGTCCTCGGCGGTTTTTCA CTTATGGAACAAAAATATTGTATCAAAGCACTGAAGCTTTTCCGTCTAAGTCCTTCCCAC CCTTTCAAAAAGTGATGCTGCCACCAAATACTTTTCAAGGAAAAGTAGCATTCATTACCG GGGGAGGAACTGGCATTGGTAAAAGAATGACAACTCATCTGTCCAGCTTAGGTGCACAGT GTGTGATAGCCAGCCGAAATATTGACATTTTGAAAGCTACTGCGGAAGAAATTTCTTCTC AAACTGGAAATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTAATATGGTGCAGA ACACTGTGTCAGAACTGATCAAAGTCATAGGACATCCTGATATTGTGATAAACAATGCAG CAGGAAATTTTATCTCCCCCACTGAAAGACTCTCTCCTAATGCCTGGAAGACCATAACTG ACATAGTTCTAAATGGTACAGCATTTGTGACACTAGAAATTGGGAAGCAACTAATTAAAG CACAGAAAGGAGCAGCATTTCTTGCTATTACAACCATCTATGCCGAGACTGGGTCAGGTT TTGTGGTACCAAGTGCTTCTGCCAAAGCAGGAGTGGAAGCCATGAGCAAGTCTCTTGCAG CTGAATGGAGTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAACATGGCGCTGCTAGGCCGGGTTTTCGCCCCTGGACACGGTCCTCGGCGGTTTTTCA CTTATGGAACAAAAATATTGTATCAAAGCACTGAAGCTTTTCCGTCTAAGTCCTTCCCAC CCTTTCAAAAAGTGATGCTGCCACCAAATACTTTTCAAGGAAAAGTAGCATTCATTACCG GGGGAGGAACTGGCATTGGTAAAAGAATGACAACTCATCTGTCCAGCTTAGGTGCACAGT GTGTGATAGCCAGCCGAAATATTGACATTTTGAAAGCTACTGCGGAAGAAATTTCTTCTC AAACTGGAAATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTAATATGGTGCAGA ACACTGTGTCAGAACTGATCAAAGTCATAGGACATCCTGATATTGTGATAAACAATGCAG CAGGAAATTTTATCTCCCCCACTGAAAGACTCTCTCCTAATGCCTGGAAGACCATAACTG ACATAGTTCTAAATGGTACAGCATTTGTGACACTAGAAATTGGGAAGCAACTAATTAAAG CACAGAAAGGAGCAGCATTTCTTGCTATTACAACCATCTATGCCGAGACTGGGTCAGGTT TTGTGGTACCAAGTGCTTCTGCCAAAGCAGGAGTGGAAGCCATGAGCAAGTCTCTTGCAG CTGAATGGAGTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 53-256, gnl|bosTau2|chr14 (45860091-45859888) | |
| 53-256, gnl|Hg17|chr8 (91098527-91098730) | |
| 53-256, gnl|Mm7|chr4 (15860243-15860040) | |
| 402-550, gnl|bosTau2|chr14 (45857508-45857360) | |
| 402-550, gnl|canFam2|chr29 (38506419-38506575) | |
| 402-550, gnl|danRer3|chr16 (42362946-42363093) | |
| 402-550, gnl|fr1|chrUn (152647077-152646942) | |
| 402-550, gnl|galGal2|chr2 (123738632-123738786) | |
| 402-550, gnl|hg17|chr8 (91102291-91102447) | |
| 402-550, gnl|Hg17|chr8 (91102313-91102461) | |
| 402-550, gnl|loxAfr1|scaffold_66123 (4921-4776) | |
| 402-550, gnl|mm7|chr4 (15857043-15856889) | |
| 402-550, gnl|Mm7|chr4 (15857021-15856873) | |
| 402-550, gnl|monDom2|scaffold_3 (77023883-77023727) | |
| 402-550, gnl|oryCun1|scaffold_204803 (12141-12297) | |
| 402-550, gnl|panTro1|chr7 (93321918-93322073) | |
| 402-550, gnl|rheMac2|chr8 (92666226-92666382) | |
| 402-550, gnl|rn3|chr5 (30504608-30504456) | |
| 402-550, gnl|tetNig1|chrUn_random (46862426-46862561) | |
| 402-550, gnl|xenTro1|scaffold_59 (2674696-2674540) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 53-256, gnl|bosTau2|chr14 (45860091-45859888) | |
| 53-256, gnl|Hg17|chr8 (91098527-91098730) | |
| 53-256, gnl|Mm7|chr4 (15860243-15860040) | |
| 402-550, gnl|bosTau2|chr14 (45857508-45857360) | |
| 402-550, gnl|canFam2|chr29 (38506419-38506575) | |
| 402-550, gnl|danRer3|chr16 (42362946-42363093) | |
| 402-550, gnl|fr1|chrUn (152647077-152646942) | |
| 402-550, gnl|galGal2|chr2 (123738632-123738786) | |
| 402-550, gnl|hg17|chr8 (91102291-91102447) | |
| 402-550, gnl|Hg17|chr8 (91102313-91102461) | |
| 402-550, gnl|loxAfr1|scaffold_66123 (4921-4776) | |
| 402-550, gnl|mm7|chr4 (15857043-15856889) | |
| 402-550, gnl|Mm7|chr4 (15857021-15856873) | |
| 402-550, gnl|monDom2|scaffold_3 (77023883-77023727) | |
| 402-550, gnl|oryCun1|scaffold_204803 (12141-12297) | |
| 402-550, gnl|panTro1|chr7 (93321918-93322073) | |
| 402-550, gnl|rheMac2|chr8 (92666226-92666382) | |
| 402-550, gnl|rn3|chr5 (30504608-30504456) | |
| 402-550, gnl|tetNig1|chrUn_random (46862426-46862561) | |
| 402-550, gnl|xenTro1|scaffold_59 (2674696-2674540) |
| Expressed library(ies): 8 entry(ies) | More info |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
| mcp (0.170648) | |
| nje (0.16592) | |
| lun (0.150489) | |
| csk (0.140746) | |
| ssp (0.13552) | |
| nmm (0.132802) | |
| eje (0.0988338) | |
| ldo (0.0970026) |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) | |
| nje (0.16592) | |
| lun (0.150489) | |
| csk (0.140746) | |
| ssp (0.13552) | |
| nmm (0.132802) | |
| eje (0.0988338) | |
| ldo (0.0970026) |