Ss1.1-rssp09_g12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTCTGGCTCTGGTGTAAGGACCGGATTCAAGTTCCAGCCTTGCCTCTCGACCTCCCCAAG CCTCAGCTTCCTTATCTGTTACGTGGGAACAACAGTCATCATTGTCATCATGTATTGAGA ACTTGCTACAATGCCAGCTGAGAAGAGGCACAGAGACGTTGGTGACTGGACAGGAGTCAC ACGACTACGACACCGGTAGCTTCTTCACAGACTCAGCGCGTCCCCAGAAGGAGGAGGACA AAATGACCAAGTTCAAGGAGGCAGTGACCTTCAAGGACGTGGCCGTGGTCTTCACGGAGG AGGAGCTGGGGCTGCTGGACCTCGCCCAGAGGAAGCTGTACCAGGAAGTGATGCTGGAGA ACTTCCGGAACCTGGTCTCTGTGGGGCGTCACTCCTTCACACCAGATATAATATCCCAGG TGGAGAGAGAAGAAAAGCTTTGGATGATCAAGTCAGCAACCCCGAGCTATTGCTCCTCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTCTGGCTCTGGTGTAAGGACCGGATTCAAGTTCCAGCCTTGCCTCTCGACCTCCCCAAG CCTCAGCTTCCTTATCTGTTACGTGGGAACAACAGTCATCATTGTCATCATGTATTGAGA ACTTGCTACAATGCCAGCTGAGAAGAGGCACAGAGACGTTGGTGACTGGACAGGAGTCAC ACGACTACGACACCGGTAGCTTCTTCACAGACTCAGCGCGTCCCCAGAAGGAGGAGGACA AAATGACCAAGTTCAAGGAGGCAGTGACCTTCAAGGACGTGGCCGTGGTCTTCACGGAGG AGGAGCTGGGGCTGCTGGACCTCGCCCAGAGGAAGCTGTACCAGGAAGTGATGCTGGAGA ACTTCCGGAACCTGGTCTCTGTGGGGCGTCACTCCTTCACACCAGATATAATATCCCAGG TGGAGAGAGAAGAAAAGCTTTGGATGATCAAGTCAGCAACCCCGAGCTATTGCTCCTCAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 6-137, gnl|bosTau2|chr14 (25828790-25828919) | |
| 6-137, gnl|Hg17|chr19 (49120522-49120394) | |
| 6-137, gnl|Mm7|chr7 (21100136-21100031) | |
| 236-385, gnl|bosTau2|chr10 (9012882-9012732) | |
| 236-385, gnl|canFam2|chr17 (37998027-37997930) | |
| 236-385, gnl|canFam2|chr24 (21662663-21662500) | |
| 236-385, gnl|dasNov1|scaffold_26600 (41328-41182) | |
| 236-385, gnl|dasNov1|scaffold_52595 (475-378) | |
| 236-385, gnl|echTel1|scaffold_299251 (17383-17545) | |
| 236-385, gnl|echTel1|scaffold_308283 (109027-108931) | |
| 236-385, gnl|galGal2|chrUn (125533105-125533263) | |
| 236-385, gnl|hg17|chr2 (95265074-95265171) | |
| 236-385, gnl|Hg17|chr2 (95265079-95265229) | |
| 236-385, gnl|hg17|chr20 (2421340-2421503) | |
| 236-385, gnl|loxAfr1|scaffold_6431 (37494-37332) | |
| 236-385, gnl|loxAfr1|scaffold_6451 (3709-3806) | |
| 236-385, gnl|mm7|chr13 (65092610-65092535) | |
| 236-385, gnl|Mm7|chr2 (127321899-127321711) | |
| 236-385, gnl|mm7|chr4 (146500427-146500290) | |
| 236-385, gnl|monDom2|scaffold_1 (66411650-66411743) | |
| 236-385, gnl|monDom2|scaffold_43 (17867834-17867983) | |
| 236-385, gnl|oryCun1|scaffold_172922 (10291-10448) | |
| 236-385, gnl|oryCun1|scaffold_210891 (58724-58627) | |
| 236-385, gnl|panTro1|chr12 (98249925-98250022) | |
| 236-385, gnl|panTro1|chr21_random (4040026-4039863) | |
| 236-385, gnl|rheMac2|chr10 (35802098-35802261) | |
| 236-385, gnl|rheMac2|chr13 (96274211-96274308) | |
| 236-385, gnl|rn3|chr1 (84864742-84864816) | |
| 236-385, gnl|rn3|chr1 (85178363-85178498) | |
| 236-385, gnl|xenTro1|scaffold_1044 (89094-89166) | |
| 236-385, gnl|xenTro1|scaffold_106 (267371-267217) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-137, gnl|bosTau2|chr14 (25828790-25828919) | |
| 6-137, gnl|Hg17|chr19 (49120522-49120394) | |
| 6-137, gnl|Mm7|chr7 (21100136-21100031) | |
| 236-385, gnl|bosTau2|chr10 (9012882-9012732) | |
| 236-385, gnl|canFam2|chr17 (37998027-37997930) | |
| 236-385, gnl|canFam2|chr24 (21662663-21662500) | |
| 236-385, gnl|dasNov1|scaffold_26600 (41328-41182) | |
| 236-385, gnl|dasNov1|scaffold_52595 (475-378) | |
| 236-385, gnl|echTel1|scaffold_299251 (17383-17545) | |
| 236-385, gnl|echTel1|scaffold_308283 (109027-108931) | |
| 236-385, gnl|galGal2|chrUn (125533105-125533263) | |
| 236-385, gnl|hg17|chr2 (95265074-95265171) | |
| 236-385, gnl|Hg17|chr2 (95265079-95265229) | |
| 236-385, gnl|hg17|chr20 (2421340-2421503) | |
| 236-385, gnl|loxAfr1|scaffold_6431 (37494-37332) | |
| 236-385, gnl|loxAfr1|scaffold_6451 (3709-3806) | |
| 236-385, gnl|mm7|chr13 (65092610-65092535) | |
| 236-385, gnl|Mm7|chr2 (127321899-127321711) | |
| 236-385, gnl|mm7|chr4 (146500427-146500290) | |
| 236-385, gnl|monDom2|scaffold_1 (66411650-66411743) | |
| 236-385, gnl|monDom2|scaffold_43 (17867834-17867983) | |
| 236-385, gnl|oryCun1|scaffold_172922 (10291-10448) | |
| 236-385, gnl|oryCun1|scaffold_210891 (58724-58627) | |
| 236-385, gnl|panTro1|chr12 (98249925-98250022) | |
| 236-385, gnl|panTro1|chr21_random (4040026-4039863) | |
| 236-385, gnl|rheMac2|chr10 (35802098-35802261) | |
| 236-385, gnl|rheMac2|chr13 (96274211-96274308) | |
| 236-385, gnl|rn3|chr1 (84864742-84864816) | |
| 236-385, gnl|rn3|chr1 (85178363-85178498) | |
| 236-385, gnl|xenTro1|scaffold_1044 (89094-89166) | |
| 236-385, gnl|xenTro1|scaffold_106 (267371-267217) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fcc (0.197785) | |
| ssp (0.13552) | |
| cov (0.132153) | |
| eep (0.122564) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.197785) | |
| ssp (0.13552) | |
| cov (0.132153) | |
| eep (0.122564) |