Non-Coding RNA Search

Ss1.1-rssp11_g11.5

Sequence:


               
               TGACTAATTTTTAATTCCCTTCCTTTTATCTTTAAGTATGGCTTTCCCAACGAAAGGCTA
AGAATTCAAGAACGGTCTTAACTGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGT
CTCAGCAGCCTCCGGGGGGGTGGGAGGGAAGCTTAGCCTAGCAGTCAGTGACTTACTTGC
ACTTTTTTGCACACTGATAGAAAGCAAAAGTCTGGTATTAATTGGTTTAGTCAGTAATCT
CCCAAGTAGTGGTAATTTATAAAGGAGTGTATAGTAGTGTACTGACTGCTAAGTGTACTA
TACTGTTTGCTTTACTAATCACCTAATTCATTGCAGTTCATACTTAGTGACTCAAAGTTT
AGAACCACAATCTGTAGGCTTTAAGAATTGCTTTTAAACCTTTTTAAGTGATAAACTCTG
GAAGTGGTCTTAAGGTTAGCAAATAATTATCAGTATTAAACATGGCATTATTTAATTAGT
CCTGCTGCAAGAAAGGCACTTCAGTGAATATGTGACTAGTAAAGCTTGACTATGTTTGGA
TCTAATAGAGTTCATGAAATCTGTAACTTGGGATTGTAAATGAATGGATAAAATAGGTTA
AGGCCAAGATGTTTGAAATGAATGCAATATTAATAGATGCATATATAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGACTAATTTTTAATTCCCTTCCTTTTATCTTTAAGTATGGCTTTCCCAACGAAAGGCTA
AGAATTCAAGAACGGTCTTAACTGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGT
CTCAGCAGCCTCCGGGGGGGTGGGAGGGAAGCTTAGCCTAGCAGTCAGTGACTTACTTGC
ACTTTTTTGCACACTGATAGAAAGCAAAAGTCTGGTATTAATTGGTTTAGTCAGTAATCT
CCCAAGTAGTGGTAATTTATAAAGGAGTGTATAGTAGTGTACTGACTGCTAAGTGTACTA
TACTGTTTGCTTTACTAATCACCTAATTCATTGCAGTTCATACTTAGTGACTCAAAGTTT
AGAACCACAATCTGTAGGCTTTAAGAATTGCTTTTAAACCTTTTTAAGTGATAAACTCTG
GAAGTGGTCTTAAGGTTAGCAAATAATTATCAGTATTAAACATGGCATTATTTAATTAGT
CCTGCTGCAAGAAAGGCACTTCAGTGAATATGTGACTAGTAAAGCTTGACTATGTTTGGA
TCTAATAGAGTTCATGAAATCTGTAACTTGGGATTGTAAATGAATGGATAAAATAGGTTA
AGGCCAAGATGTTTGAAATGAATGCAATATTAATAGATGCATATATAC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-648, gnl|bosTau2|chr9 (61803321-61802673)
               

               
               1-648, gnl|Hg17|chr6 (163957354-163957999)
               

               
               1-648, gnl|Mm7|chr17 (8932952-8932313)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-648, gnl|bosTau2|chr9 (61803321-61802673)
               

               
               1-648, gnl|Hg17|chr6 (163957354-163957999)
               

               
               1-648, gnl|Mm7|chr17 (8932952-8932313)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               fco (0.314416)
               

               
               fbs (0.175346)
               

               
               ssp (0.13552)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)
               

               
               fbs (0.175346)
               

               
               ssp (0.13552)

	1-648, gnl\|bosTau2\|chr9 (61803321-61802673)
	1-648, gnl\|Hg17\|chr6 (163957354-163957999)
	1-648, gnl\|Mm7\|chr17 (8932952-8932313)