Ss1.1-rssp18_i14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGGGAGCCGGCGCCAGCGGGCTGCTGAGGTGGCTGTCGCCCGCTCCGAGCTGCGGCTTC CCCGGGTCGAACCCCGATGGAGGCCGAGGCCGCGGGCCGCCCCCCAGGCAGGGTCGAGGC GGCGCTCAGCTGCTTCTCTTTCAACCAGGACTGCACATCCCTTGCCATTGGAACCAAAGC CGGTTATAAGCTGTTCTCTTTGAGTTCTGTGGAGCAACTGGACCAAGTCCACGGGAGCAA TGAAATCCCAGACGTCTACATCGTGGAGCGCCTCTTCTCCAGCAGCCTGGTGGTGGTGGT GAGTCACACGAAGCCGCGCCAAATGAATGTCTATCACTTCAAGAAAGGCACGGAGATCTG TAATTACAGCTACTCCAGCAACATCCTGTCCATCAGGCTGAACCGGCAGAGGCTGCTCGT CTGCCTGGAGGAGTCTATTTACATTCACAACATTAAAGACATGAAGCTGTTGAAGACCAT CCTGGATATTCCTGCAAACCCAACAGGTCTGTGCGCCCTCTCTATCAACCATTCCAATTC TTACGTGGCCTATCCTGGAAGCCTGACGACAGGAGAGATTGTGCTGTACGATGGACACTC CCTGAAAACACTCTGCACCATTGCTGCCCATGAGGGGACACTGGCTGCCATCGCCTTCAA TGCCGCCGGCTCCAAACTGGCGAGCGCGTCGGAGAAGGGCACTGTCATCCGGGTGTTCTC GGTACCCGAAGGGCAAAAGCTCTATGAGTTTCGGAGAGGAATGAAAAGGTATGTGACCAT CAGCTCTCTGGTTTTCAGTATGGATTCCCAGTTCCTCTGTGCCTCAAGCAACACAGAAAC TGTGCACATCTTCAAGCTGGAACACCTCACCAACAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGGGAGCCGGCGCCAGCGGGCTGCTGAGGTGGCTGTCGCCCGCTCCGAGCTGCGGCTTC CCCGGGTCGAACCCCGATGGAGGCCGAGGCCGCGGGCCGCCCCCCAGGCAGGGTCGAGGC GGCGCTCAGCTGCTTCTCTTTCAACCAGGACTGCACATCCCTTGCCATTGGAACCAAAGC CGGTTATAAGCTGTTCTCTTTGAGTTCTGTGGAGCAACTGGACCAAGTCCACGGGAGCAA TGAAATCCCAGACGTCTACATCGTGGAGCGCCTCTTCTCCAGCAGCCTGGTGGTGGTGGT GAGTCACACGAAGCCGCGCCAAATGAATGTCTATCACTTCAAGAAAGGCACGGAGATCTG TAATTACAGCTACTCCAGCAACATCCTGTCCATCAGGCTGAACCGGCAGAGGCTGCTCGT CTGCCTGGAGGAGTCTATTTACATTCACAACATTAAAGACATGAAGCTGTTGAAGACCAT CCTGGATATTCCTGCAAACCCAACAGGTCTGTGCGCCCTCTCTATCAACCATTCCAATTC TTACGTGGCCTATCCTGGAAGCCTGACGACAGGAGAGATTGTGCTGTACGATGGACACTC CCTGAAAACACTCTGCACCATTGCTGCCCATGAGGGGACACTGGCTGCCATCGCCTTCAA TGCCGCCGGCTCCAAACTGGCGAGCGCGTCGGAGAAGGGCACTGTCATCCGGGTGTTCTC GGTACCCGAAGGGCAAAAGCTCTATGAGTTTCGGAGAGGAATGAAAAGGTATGTGACCAT CAGCTCTCTGGTTTTCAGTATGGATTCCCAGTTCCTCTGTGCCTCAAGCAACACAGAAAC TGTGCACATCTTCAAGCTGGAACACCTCACCAACAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
| 53-156, gnl|bosTau2|chr19 (56295014-56295117) | |
| 53-156, gnl|Hg17|chr17 (63965181-63965078) | |
| 53-156, gnl|Mm7|chr11 (109720377-109720274) | |
| 240-409, gnl|bosTau2|chr19 (56301201-56301370) | |
| 240-409, gnl|canFam2|chr9 (18268204-18268418) | |
| 240-409, gnl|danRer3|chrNA (90209011-90209192) | |
| 240-409, gnl|dasNov1|scaffold_3565 (39023-38809) | |
| 240-409, gnl|echTel1|scaffold_316017 (98101-97921) | |
| 240-409, gnl|fr1|chrUn (91448151-91447954) | |
| 240-409, gnl|galGal2|chr18 (7635438-7635638) | |
| 240-409, gnl|hg17|chr17 (63958451-63958664) | |
| 240-409, gnl|Hg17|chr17 (63958633-63958464) | |
| 240-409, gnl|loxAfr1|scaffold_4550 (56882-56672) | |
| 240-409, gnl|mm7|chr11 (109712701-109712918) | |
| 240-409, gnl|Mm7|chr11 (109712883-109712714) | |
| 240-409, gnl|monDom2|scaffold_18 (21422919-21423117) | |
| 240-409, gnl|oryCun1|scaffold_198829 (119541-119328) | |
| 240-409, gnl|panTro1|chr19 (67259048-67259261) | |
| 240-409, gnl|rheMac2|chr16 (63720358-63720572) | |
| 240-409, gnl|rn3|chr10 (98738920-98738702) | |
| 240-409, gnl|tetNig1|chr2 (4152429-4152629) | |
| 240-409, gnl|xenTro1|scaffold_667 (442384-442577) | |
| 504-604, gnl|bosTau2|chr19 (56315878-56315978) | |
| 504-604, gnl|Hg17|chr17 (63944218-63944118) | |
| 504-604, gnl|Mm7|chr11 (109694236-109694136) | |
| 767-876, gnl|bosTau2|chr19 (56317772-56317881) | |
| 767-876, gnl|canFam2|chr9 (18253107-18253221) | |
| 767-876, gnl|danRer3|chrUn (99951967-99952095) | |
| 767-876, gnl|dasNov1|scaffold_9322 (59686-59562) | |
| 767-876, gnl|echTel1|scaffold_293893 (4427-4304) | |
| 767-876, gnl|fr1|chrUn (91449264-91449138) | |
| 767-876, gnl|galGal2|chr18 (7626120-7626248) | |
| 767-876, gnl|hg17|chr17 (63941198-63941324) | |
| 767-876, gnl|Hg17|chr17 (63941313-63941204) | |
| 767-876, gnl|loxAfr1|scaffold_15609 (27169-27265) | |
| 767-876, gnl|mm7|chr11 (109691407-109691534) | |
| 767-876, gnl|Mm7|chr11 (109691522-109691413) | |
| 767-876, gnl|monDom2|scaffold_18 (21395653-21395779) | |
| 767-876, gnl|oryCun1|scaffold_198829 (139094-138968) | |
| 767-876, gnl|panTro1|chr19 (67241680-67241806) | |
| 767-876, gnl|rheMac2|chr3 (43789920-43790014) | |
| 767-876, gnl|rn3|chr10 (98759864-98759737) | |
| 767-876, gnl|tetNig1|chr2 (4151461-4151587) | |
| 767-876, gnl|xenTro1|scaffold_4229 (6293-6158) |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 53-156, gnl|bosTau2|chr19 (56295014-56295117) | |
| 53-156, gnl|Hg17|chr17 (63965181-63965078) | |
| 53-156, gnl|Mm7|chr11 (109720377-109720274) | |
| 240-409, gnl|bosTau2|chr19 (56301201-56301370) | |
| 240-409, gnl|canFam2|chr9 (18268204-18268418) | |
| 240-409, gnl|danRer3|chrNA (90209011-90209192) | |
| 240-409, gnl|dasNov1|scaffold_3565 (39023-38809) | |
| 240-409, gnl|echTel1|scaffold_316017 (98101-97921) | |
| 240-409, gnl|fr1|chrUn (91448151-91447954) | |
| 240-409, gnl|galGal2|chr18 (7635438-7635638) | |
| 240-409, gnl|hg17|chr17 (63958451-63958664) | |
| 240-409, gnl|Hg17|chr17 (63958633-63958464) | |
| 240-409, gnl|loxAfr1|scaffold_4550 (56882-56672) | |
| 240-409, gnl|mm7|chr11 (109712701-109712918) | |
| 240-409, gnl|Mm7|chr11 (109712883-109712714) | |
| 240-409, gnl|monDom2|scaffold_18 (21422919-21423117) | |
| 240-409, gnl|oryCun1|scaffold_198829 (119541-119328) | |
| 240-409, gnl|panTro1|chr19 (67259048-67259261) | |
| 240-409, gnl|rheMac2|chr16 (63720358-63720572) | |
| 240-409, gnl|rn3|chr10 (98738920-98738702) | |
| 240-409, gnl|tetNig1|chr2 (4152429-4152629) | |
| 240-409, gnl|xenTro1|scaffold_667 (442384-442577) | |
| 504-604, gnl|bosTau2|chr19 (56315878-56315978) | |
| 504-604, gnl|Hg17|chr17 (63944218-63944118) | |
| 504-604, gnl|Mm7|chr11 (109694236-109694136) | |
| 767-876, gnl|bosTau2|chr19 (56317772-56317881) | |
| 767-876, gnl|canFam2|chr9 (18253107-18253221) | |
| 767-876, gnl|danRer3|chrUn (99951967-99952095) | |
| 767-876, gnl|dasNov1|scaffold_9322 (59686-59562) | |
| 767-876, gnl|echTel1|scaffold_293893 (4427-4304) | |
| 767-876, gnl|fr1|chrUn (91449264-91449138) | |
| 767-876, gnl|galGal2|chr18 (7626120-7626248) | |
| 767-876, gnl|hg17|chr17 (63941198-63941324) | |
| 767-876, gnl|Hg17|chr17 (63941313-63941204) | |
| 767-876, gnl|loxAfr1|scaffold_15609 (27169-27265) | |
| 767-876, gnl|mm7|chr11 (109691407-109691534) | |
| 767-876, gnl|Mm7|chr11 (109691522-109691413) | |
| 767-876, gnl|monDom2|scaffold_18 (21395653-21395779) | |
| 767-876, gnl|oryCun1|scaffold_198829 (139094-138968) | |
| 767-876, gnl|panTro1|chr19 (67241680-67241806) | |
| 767-876, gnl|rheMac2|chr3 (43789920-43790014) | |
| 767-876, gnl|rn3|chr10 (98759864-98759737) | |
| 767-876, gnl|tetNig1|chr2 (4151461-4151587) | |
| 767-876, gnl|xenTro1|scaffold_4229 (6293-6158) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) | |
| ssp (0.13552) |