Non-Coding RNA Search

Ss1.1-rssp28_f21.5

Sequence:


               
               CGCGGGCACGCGGCACGCTGGGTGCGCCCCGGGGGCATGTCCGCGCGCCACCGCCCGGGC
TGCAGCGGTCCACGCGAGGAAGTCACTAGACGGCACACTCTTCCAAGATCATAACTGGGC
TGTTGGAGTAACTTGGAAAAGAAGAATAAAGGATCAAAAAAACCATGGCAAAAGTAAATA
GAGCTCGGTCTACCTCTCCTCCAGATGGAGGCTGGGGCTGGATGATTGTGGCTGGTTGTT
TCCTTGTTACCATCTGCACCCGGGCAGTAACCAGATGTATTTCCATTTTTTTAGTGGAGT
TCCAGACATACTTCTCTCAGGACTATGCACAGACAGCCTGGATCCATTCCATTGTAGACT
GTGTGACCATGCTCTGTGGTGAGTATTTCCAGGGATAGACAGTTACTGGCTCCCCTTGAA
CCATTCATGACAATGACCTTCCTCTGCCTTTGATTACCAGTTTTTCTGAGTAGAAGGGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCGGGCACGCGGCACGCTGGGTGCGCCCCGGGGGCATGTCCGCGCGCCACCGCCCGGGC
TGCAGCGGTCCACGCGAGGAAGTCACTAGACGGCACACTCTTCCAAGATCATAACTGGGC
TGTTGGAGTAACTTGGAAAAGAAGAATAAAGGATCAAAAAAACCATGGCAAAAGTAAATA
GAGCTCGGTCTACCTCTCCTCCAGATGGAGGCTGGGGCTGGATGATTGTGGCTGGTTGTT
TCCTTGTTACCATCTGCACCCGGGCAGTAACCAGATGTATTTCCATTTTTTTAGTGGAGT
TCCAGACATACTTCTCTCAGGACTATGCACAGACAGCCTGGATCCATTCCATTGTAGACT
GTGTGACCATGCTCTGTGGTGAGTATTTCCAGGGATAGACAGTTACTGGCTCCCCTTGAA
CCATTCATGACAATGACCTTCCTCTGCCTTTGATTACCAGTTTTTCTGAGTAGAAGGGCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               77-274, gnl|bosTau2|chr26 (7253077-7253271)
               

               
               77-274, gnl|Hg17|chr10 (91212307-91212116)
               

               
               77-274, gnl|Mm7|chr19 (34392141-34391948)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               77-274, gnl|bosTau2|chr26 (7253077-7253271)
               

               
               77-274, gnl|Hg17|chr10 (91212307-91212116)
               

               
               77-274, gnl|Mm7|chr19 (34392141-34391948)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ssp (0.13552)
               

               
               ova (0.129132)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.13552)
               

               
               ova (0.129132)

	77-274, gnl\|bosTau2\|chr26 (7253077-7253271)
	77-274, gnl\|Hg17\|chr10 (91212307-91212116)
	77-274, gnl\|Mm7\|chr19 (34392141-34391948)