Non-Coding RNA Search

Ss1.1-rssp28_l13.5

Sequence:


               
               GTTCATTTACATTTTCAGGAAACTTCTGAGATACCAGTGACCGCACTGACACTTTGTGCT
TCTAGTGGCTTTGCCATAATTCATTTCTACCAATAAAGCACAGCCCAGTGAACAGCACTT
AGCTCCCTAGCAAACCTCCAGGCATGAAGTGGGCGAACTGGCTCATCTCTTGCTCCGTGC
CTCTTTGCCTCCCCCTGCCCCCCATGGCAAAATTATGAGGGTATGATCTCAGGGCTGCTA
ATGTGGCATTTCCAAATCTAGATGATTCTCCTCAAGAATAAAAGCACATCTGTGGATTGG
ACTTGGCTGCAGGGCCAACTTGGTTCCTCCTGTTCTGTGCCCGTGAATGTTTGGAATAGG
GTGTGAGTGTGTCTGATCATCTCTCTTGGAAGCTTCCTGAACCTTCCAAGCCTTGTGGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCATTTACATTTTCAGGAAACTTCTGAGATACCAGTGACCGCACTGACACTTTGTGCT
TCTAGTGGCTTTGCCATAATTCATTTCTACCAATAAAGCACAGCCCAGTGAACAGCACTT
AGCTCCCTAGCAAACCTCCAGGCATGAAGTGGGCGAACTGGCTCATCTCTTGCTCCGTGC
CTCTTTGCCTCCCCCTGCCCCCCATGGCAAAATTATGAGGGTATGATCTCAGGGCTGCTA
ATGTGGCATTTCCAAATCTAGATGATTCTCCTCAAGAATAAAAGCACATCTGTGGATTGG
ACTTGGCTGCAGGGCCAACTTGGTTCCTCCTGTTCTGTGCCCGTGAATGTTTGGAATAGG
GTGTGAGTGTGTCTGATCATCTCTCTTGGAAGCTTCCTGAACCTTCCAAGCCTTGTGGTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-316, gnl|bosTau2|chr21 (1331599-1331922)
               

               
               1-316, gnl|Hg17|chr15 (76360092-76360406)
               

               
               1-316, gnl|Mm7|chr9 (54744244-54744548)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-316, gnl|bosTau2|chr21 (1331599-1331922)
               

               
               1-316, gnl|Hg17|chr15 (76360092-76360406)
               

               
               1-316, gnl|Mm7|chr9 (54744244-54744548)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hlv (0.139256)
               

               
               ssp (0.13552)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.139256)
               

               
               ssp (0.13552)

	1-316, gnl\|bosTau2\|chr21 (1331599-1331922)
	1-316, gnl\|Hg17\|chr15 (76360092-76360406)
	1-316, gnl\|Mm7\|chr9 (54744244-54744548)