Non-Coding RNA Search

Ss1.1-rssp31_g15.5

Sequence:


               
               CTCATTTATTTT------------TCTTTTCTAGGGCCACTTCCTGCGGCATATGGAGGT
TCCCAGGCTAGGCGGTCAAATCAGCTGTAGCCATCGGCCTATGCCACAGCAATGCGGGAT
CTGAGCCATGTCTGCAGCCTACATGACAGCTCTTGGCAACACTGGGTCCTTAACCTACTG
AGTGAGGTCAGGGATCGAACCCCGAAACCTCATGGTTCCTAGTCAAATTCGTTAACCACT
GCGCCACGACGGGAACTCCCCTGGGCCTCATTTTAAAAGCCTGACTCGAATTAGATTATC
ACCAAGAAAGGTAGGTGTGCCTACTAAGGCTTAAATTTAGTATTTCTCTTTGGGGAACAT
ATTTAAAGCTGCTAAGTACTTCACAGTACTGCTGTGTGAAAAATGTATCCTTTCTTCCTA
GGACTTATTAAACTGGTTTCAAAGCACAGAGCTCAAGTAATTTACACGCGAAATACCAAG
GGTGGAGATGCCCCAGCTGCTGGAGAAGATGCATAAACAGGTGAGCAAACACCCAGGGAG
GGGCTCTTGGTATAGGAAGTATTCACAAAGCTCTATAGTTCTGATTCTTTAATTTTTTTT
TTAACAGGTCCAACCAGCTGTACACTGTACATTTTGAAAAATAAAACTTTAATTAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCATTTATTTT------------TCTTTTCTAGGGCCACTTCCTGCGGCATATGGAGGT
TCCCAGGCTAGGCGGTCAAATCAGCTGTAGCCATCGGCCTATGCCACAGCAATGCGGGAT
CTGAGCCATGTCTGCAGCCTACATGACAGCTCTTGGCAACACTGGGTCCTTAACCTACTG
AGTGAGGTCAGGGATCGAACCCCGAAACCTCATGGTTCCTAGTCAAATTCGTTAACCACT
GCGCCACGACGGGAACTCCCCTGGGCCTCATTTTAAAAGCCTGACTCGAATTAGATTATC
ACCAAGAAAGGTAGGTGTGCCTACTAAGGCTTAAATTTAGTATTTCTCTTTGGGGAACAT
ATTTAAAGCTGCTAAGTACTTCACAGTACTGCTGTGTGAAAAATGTATCCTTTCTTCCTA
GGACTTATTAAACTGGTTTCAAAGCACAGAGCTCAAGTAATTTACACGCGAAATACCAAG
GGTGGAGATGCCCCAGCTGCTGGAGAAGATGCATAAACAGGTGAGCAAACACCCAGGGAG
GGGCTCTTGGTATAGGAAGTATTCACAAAGCTCTATAGTTCTGATTCTTTAATTTTTTTT
TTAACAGGTCCAACCAGCTGTACACTGTACATTTTGAAAAATAAAACTTTAATTAAAAAA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               254-639, gnl|bosTau2|chr15 (14200622-14200236)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               254-639, gnl|bosTau2|chr15 (14200622-14200236)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cje (0.165235)
               

               
               ssp (0.13552)
               

               
               cly (0.120642)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cje (0.165235)
               

               
               ssp (0.13552)
               

               
               cly (0.120642)