Non-Coding RNA Search

Ss1.1-rssp33_l19.5

Sequence:


               
               AGCATCTCATTCTCATTTGGAGTGTATCCAATTTTTTACTGAAGTGTTCCATCTTCGCAT
CTGGCTGATATTTTCAATGATGTCCACAGCATTTTCAGGACGCTTATCTAAGACATTGGT
CAGCATTGCAGAAAGATGATCATATCTACCCCAAAAGAGAAAATTACAGATAATATCCCT
GTCAAAAGCATCTGAAGAGACATTTTATGCATTTTCAGTGGGTTTTTAGGAAACTTTTAA
CAACTGGAAGCTATAGAGATTTTCAGTGGAAAAACTTCTACCACTGCCAGGAAGAGCTTA
TCTTAGAACTGATTTAGAGATGCCTTCAATATTATATGCATATTTAACTTATTAAAGAAA
AAGATAATACAGCAAGCTATATATTCTATATTGGGTACATTTTCACATTTCAGATTGAAA
TCTTTATATATTTAAAAGTGACTAAACTTATTTTTTCCTTTTTTTACCATCCCCCTTCCT
CTCCCCTTATTAAATTGTTTGATTTCTAAATCCAGTTGACTCTTTTAAAATCTATCATTT
TCCTTCCCATTTCCTAATCCAATTACGTACTTCAGTGTTTTTAGACCTATAAAAAATACA
TTTCATATTGTAACTCTCCCCCACCCACAGACACAATGGAAAAAAATGTGTCCTCAGATG
TCACTAACCTTTATTAAAATGTGATACACTCTAATATTTTTTGTTCTCTTCTATTAAAAA
CACTTCTATAGCTTTTTATTTCATAACTGAATTAGTGAAACTACCTTTAACCTCTCTATT
GATGCATTAATTATCCTGTAACTTGTCATTAATTCCTTATATTTTAAACCTAAGTGCTTA
GGATGTGCTTTTTTAAATTTTTATTTATTTATTTATTGTCTTTTTAGGGCTGCAGCCGCA
GCATATGGAGGTTCCCAGGCTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCATCTCATTCTCATTTGGAGTGTATCCAATTTTTTACTGAAGTGTTCCATCTTCGCAT
CTGGCTGATATTTTCAATGATGTCCACAGCATTTTCAGGACGCTTATCTAAGACATTGGT
CAGCATTGCAGAAAGATGATCATATCTACCCCAAAAGAGAAAATTACAGATAATATCCCT
GTCAAAAGCATCTGAAGAGACATTTTATGCATTTTCAGTGGGTTTTTAGGAAACTTTTAA
CAACTGGAAGCTATAGAGATTTTCAGTGGAAAAACTTCTACCACTGCCAGGAAGAGCTTA
TCTTAGAACTGATTTAGAGATGCCTTCAATATTATATGCATATTTAACTTATTAAAGAAA
AAGATAATACAGCAAGCTATATATTCTATATTGGGTACATTTTCACATTTCAGATTGAAA
TCTTTATATATTTAAAAGTGACTAAACTTATTTTTTCCTTTTTTTACCATCCCCCTTCCT
CTCCCCTTATTAAATTGTTTGATTTCTAAATCCAGTTGACTCTTTTAAAATCTATCATTT
TCCTTCCCATTTCCTAATCCAATTACGTACTTCAGTGTTTTTAGACCTATAAAAAATACA
TTTCATATTGTAACTCTCCCCCACCCACAGACACAATGGAAAAAAATGTGTCCTCAGATG
TCACTAACCTTTATTAAAATGTGATACACTCTAATATTTTTTGTTCTCTTCTATTAAAAA
CACTTCTATAGCTTTTTATTTCATAACTGAATTAGTGAAACTACCTTTAACCTCTCTATT
GATGCATTAATTATCCTGTAACTTGTCATTAATTCCTTATATTTTAAACCTAAGTGCTTA
GGATGTGCTTTTTTAAATTTTTATTTATTTATTTATTGTCTTTTTAGGGCTGCAGCCGCA
GCATATGGAGGTTCCCAGGCTGGG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-858, gnl|bosTau2|chr9 (17006399-17005508)
               

               
               1-858, gnl|Hg17|chr6 (117050770-117049801)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-858, gnl|bosTau2|chr9 (17006399-17005508)
               

               
               1-858, gnl|Hg17|chr6 (117050770-117049801)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ssp (0.13552)
               

               
               thg (0.126791)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.13552)
               

               
               thg (0.126791)

	1-858, gnl\|bosTau2\|chr9 (17006399-17005508)
	1-858, gnl\|Hg17\|chr6 (117050770-117049801)