Ss1.1-rste02_f5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAACAGTCAGCTAGATCCTGTTTCTCTCAACAGAAAAAAGTCACCTTAAATGGTTTCTTG GACACGCTCATGTCAGATCCTCCCCCACAGTGTCTGGTCTGGCTGCCCCTTCTGCATCGA CTGGCAAATGTAGAAAACGTCTTCCATCCAGTTGAGTGTTCGTACTGCCACAGTGAGAGC ATGATGGGATTTCGCTACCGATGCCAACAGTGTCACAATTACCAGCTCTGTCAGGACTGC TTCTGGAGGGGTCATGCCGGTGGTTCCCATAGCAACCAGCACCAAATGAAAGAGTACACG TCCTGGAAATCACCTGCCAAGAAACTCACTAATGCATTAAGCAAGTCTCTGAGCTGTGCT TCCAGCCGTGAACCTTTGCATCCCATGTTCCCCGACCAGCCTGAGAAACCACTCAACTTG GCCCACATTGTGCCGCCCAGACCTGTAACCAGCATGAACGACAGCCTGTTCTCCCACTCT GTCCCCTCCTCAGGAAGTCCTTTTATTACCAGGAGCTCGGATGGTGCTTATGGTGGAATC GTCTAGATGGATAACATGGCTCCTTCTACTCTAAAATATTCCTATAATACTCTGAACTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAACAGTCAGCTAGATCCTGTTTCTCTCAACAGAAAAAAGTCACCTTAAATGGTTTCTTG GACACGCTCATGTCAGATCCTCCCCCACAGTGTCTGGTCTGGCTGCCCCTTCTGCATCGA CTGGCAAATGTAGAAAACGTCTTCCATCCAGTTGAGTGTTCGTACTGCCACAGTGAGAGC ATGATGGGATTTCGCTACCGATGCCAACAGTGTCACAATTACCAGCTCTGTCAGGACTGC TTCTGGAGGGGTCATGCCGGTGGTTCCCATAGCAACCAGCACCAAATGAAAGAGTACACG TCCTGGAAATCACCTGCCAAGAAACTCACTAATGCATTAAGCAAGTCTCTGAGCTGTGCT TCCAGCCGTGAACCTTTGCATCCCATGTTCCCCGACCAGCCTGAGAAACCACTCAACTTG GCCCACATTGTGCCGCCCAGACCTGTAACCAGCATGAACGACAGCCTGTTCTCCCACTCT GTCCCCTCCTCAGGAAGTCCTTTTATTACCAGGAGCTCGGATGGTGCTTATGGTGGAATC GTCTAGATGGATAACATGGCTCCTTCTACTCTAAAATATTCCTATAATACTCTGAACTGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 136-306, gnl|bosTau2|chr11 (54229952-54229782) | |
| 136-306, gnl|canFam2|chr17 (22761460-22761652) | |
| 136-306, gnl|danRer3|chr17 (44986281-44986103) | |
| 136-306, gnl|dasNov1|scaffold_19157 (5860-5669) | |
| 136-306, gnl|echTel1|scaffold_310237 (124773-124601) | |
| 136-306, gnl|fr1|chrUn (2225042-2224849) | |
| 136-306, gnl|galGal2|chr3 (102777313-102777505) | |
| 136-306, gnl|hg17|chr2 (25711355-25711547) | |
| 136-306, gnl|Hg17|chr2 (25711528-25711358) | |
| 136-306, gnl|loxAfr1|scaffold_8800 (38581-38773) | |
| 136-306, gnl|mm7|chr12 (3566865-3566673) | |
| 136-306, gnl|Mm7|chr12 (3566690-3566860) | |
| 136-306, gnl|monDom2|scaffold_1 (151336047-151335852) | |
| 136-306, gnl|oryCun1|scaffold_91557 (1777-1969) | |
| 136-306, gnl|panTro1|chr12 (26617289-26617481) | |
| 136-306, gnl|rheMac2|chr13 (25514782-25514974) | |
| 136-306, gnl|rn3|chr6 (26618621-26618428) | |
| 136-306, gnl|tetNig1|chr10 (10837010-10836825) | |
| 136-306, gnl|xenTro1|scaffold_843 (479615-479807) | |
| 483-600, gnl|bosTau2|chr24 (18656590-18656470) | |
| 483-600, gnl|Hg17|chr18 (30662967-30663087) | |
| 483-600, gnl|Mm7|chr18 (23988586-23988705) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 136-306, gnl|bosTau2|chr11 (54229952-54229782) | |
| 136-306, gnl|canFam2|chr17 (22761460-22761652) | |
| 136-306, gnl|danRer3|chr17 (44986281-44986103) | |
| 136-306, gnl|dasNov1|scaffold_19157 (5860-5669) | |
| 136-306, gnl|echTel1|scaffold_310237 (124773-124601) | |
| 136-306, gnl|fr1|chrUn (2225042-2224849) | |
| 136-306, gnl|galGal2|chr3 (102777313-102777505) | |
| 136-306, gnl|hg17|chr2 (25711355-25711547) | |
| 136-306, gnl|Hg17|chr2 (25711528-25711358) | |
| 136-306, gnl|loxAfr1|scaffold_8800 (38581-38773) | |
| 136-306, gnl|mm7|chr12 (3566865-3566673) | |
| 136-306, gnl|Mm7|chr12 (3566690-3566860) | |
| 136-306, gnl|monDom2|scaffold_1 (151336047-151335852) | |
| 136-306, gnl|oryCun1|scaffold_91557 (1777-1969) | |
| 136-306, gnl|panTro1|chr12 (26617289-26617481) | |
| 136-306, gnl|rheMac2|chr13 (25514782-25514974) | |
| 136-306, gnl|rn3|chr6 (26618621-26618428) | |
| 136-306, gnl|tetNig1|chr10 (10837010-10836825) | |
| 136-306, gnl|xenTro1|scaffold_843 (479615-479807) | |
| 483-600, gnl|bosTau2|chr24 (18656590-18656470) | |
| 483-600, gnl|Hg17|chr18 (30662967-30663087) | |
| 483-600, gnl|Mm7|chr18 (23988586-23988705) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nms (0.213858) | |
| hea (0.204499) | |
| hlv (0.139256) | |
| ste (0.135208) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nms (0.213858) | |
| hea (0.204499) | |
| hlv (0.139256) | |
| ste (0.135208) |