Non-Coding RNA Search

Ss1.1-rste06_k3.5

Sequence:


               
               AGGTGTCTGCTCCTCTCTCTTCCTCCCTCTTCTTCTTCCTCTTCTGCTCCTTCCTCTTCC
TCTTCTGCTCCTTCCTCTTCTTCCTCCTCTTCTCTTTCTCTCTCTCTCTCTCTCACATTC
AGGGGGTACAGAATAACTTATAACCTCTTCTTCAAAGTACCCGTGGAAATTGAAGTGTAT
CTTAAGTGTTGTCTTTTAATTTTCTAGAATTGCTTGAACTTTAGTTGATTTCTCTATAAA
GCTGTGGAGGCTTAATAGTTGATGGAGCTGTTTTTGGCTCTGTCTTTGGTGTGTCTTGCA
TTATCTATTTCTGGTCATGAGTTCTTAATGTAATCTGCTAGATGATTAGTAAGATTCTTT
TGTGTCTGACACTTGTGAGTTGTTTTTGAGATACGTGAGGTTTCTGTGTGAGAACTGATA
ATCAAGCTCTTGATCTGCTTCCCTGAATTGCTTTTTTAGAGCCCAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGTGTCTGCTCCTCTCTCTTCCTCCCTCTTCTTCTTCCTCTTCTGCTCCTTCCTCTTCC
TCTTCTGCTCCTTCCTCTTCTTCCTCCTCTTCTCTTTCTCTCTCTCTCTCTCTCACATTC
AGGGGGTACAGAATAACTTATAACCTCTTCTTCAAAGTACCCGTGGAAATTGAAGTGTAT
CTTAAGTGTTGTCTTTTAATTTTCTAGAATTGCTTGAACTTTAGTTGATTTCTCTATAAA
GCTGTGGAGGCTTAATAGTTGATGGAGCTGTTTTTGGCTCTGTCTTTGGTGTGTCTTGCA
TTATCTATTTCTGGTCATGAGTTCTTAATGTAATCTGCTAGATGATTAGTAAGATTCTTT
TGTGTCTGACACTTGTGAGTTGTTTTTGAGATACGTGAGGTTTCTGTGTGAGAACTGATA
ATCAAGCTCTTGATCTGCTTCCCTGAATTGCTTTTTTAGAGCCCAAAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-468, gnl|bosTau2|chr25 (11786254-11786733)
               

               
               1-468, gnl|Hg17|chr16 (18725618-18725173)
               

               
               1-468, gnl|Mm7|chr7 (114055712-114055323)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-468, gnl|bosTau2|chr25 (11786254-11786733)
               

               
               1-468, gnl|Hg17|chr16 (18725618-18725173)
               

               
               1-468, gnl|Mm7|chr7 (114055712-114055323)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               ste (0.135208)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               ste (0.135208)

	1-468, gnl\|bosTau2\|chr25 (11786254-11786733)
	1-468, gnl\|Hg17\|chr16 (18725618-18725173)
	1-468, gnl\|Mm7\|chr7 (114055712-114055323)