Non-Coding RNA Search

Ss1.1-rste07_j19.5

Sequence:


               
               ACTGAACCGTAAACAGTTGCAGCATCTTTGAAAGCCAGCCAACAGTGGGTACTGTTGCAT
AGGTACTTAAGGGCCATTATTAGTAACACCCAGATGTCTGCACTGCTTTGTCTGGGTGGG
GAGAGAGTTTGTGGGTCTTATTTGCTTACATATTCAAGCTTCTTTTCAAAAAGCTCCCAA
GGCAGCTTACAACAAAAGACATAAACAATGACTTCATAAAATAGAAACAGAAAAATAAGA
AAATGCACATATGCTAATCATAAGGGACAAGGGTGTTACTCTGAGCTTTGTAGCAATGAG
GCAAAAAAAAAGGAAAACGTAATTGATGGTTTTTCAGAACAGAAATACCCATTCTCAAGG
GAGCAAAATTTCTGTTGGCATAAAATATAAAAAGAAAGTTTTCACTTGGAGCTTTAGAGA
AGGAATAGTGAATAATAAAAAGGGACAACACAGCGGTAGATTTCTTGTGGCTGATTCTTA
TACAGACCTTCAGTTAAAATTAAAGACAGAACCCCCTATGTCCCGATCCCATAGAGGCAG
TTCTACAAGGAAATAAACAAATGCCATCCAAATTTATAGATTTCTCATGATATAACATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGAACCGTAAACAGTTGCAGCATCTTTGAAAGCCAGCCAACAGTGGGTACTGTTGCAT
AGGTACTTAAGGGCCATTATTAGTAACACCCAGATGTCTGCACTGCTTTGTCTGGGTGGG
GAGAGAGTTTGTGGGTCTTATTTGCTTACATATTCAAGCTTCTTTTCAAAAAGCTCCCAA
GGCAGCTTACAACAAAAGACATAAACAATGACTTCATAAAATAGAAACAGAAAAATAAGA
AAATGCACATATGCTAATCATAAGGGACAAGGGTGTTACTCTGAGCTTTGTAGCAATGAG
GCAAAAAAAAAGGAAAACGTAATTGATGGTTTTTCAGAACAGAAATACCCATTCTCAAGG
GAGCAAAATTTCTGTTGGCATAAAATATAAAAAGAAAGTTTTCACTTGGAGCTTTAGAGA
AGGAATAGTGAATAATAAAAAGGGACAACACAGCGGTAGATTTCTTGTGGCTGATTCTTA
TACAGACCTTCAGTTAAAATTAAAGACAGAACCCCCTATGTCCCGATCCCATAGAGGCAG
TTCTACAAGGAAATAAACAAATGCCATCCAAATTTATAGATTTCTCATGATATAACATGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-600, gnl|bosTau2|chr24 (18579482-18580095)
               

               
               2-600, gnl|Hg17|chr18 (30701793-30702415)
               

               
               2-600, gnl|Mm7|chr18 (24019500-24020081)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-600, gnl|bosTau2|chr24 (18579482-18580095)
               

               
               2-600, gnl|Hg17|chr18 (30701793-30702415)
               

               
               2-600, gnl|Mm7|chr18 (24019500-24020081)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.270416)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.270416)

	2-600, gnl\|bosTau2\|chr24 (18579482-18580095)
	2-600, gnl\|Hg17\|chr18 (30701793-30702415)
	2-600, gnl\|Mm7\|chr18 (24019500-24020081)