Non-Coding RNA Search

Ss1.1-rste10_o12.5

Sequence:


               
               ACATACATAAATCTGAAAGTGTCTTAGAGAAGGTAAAATGTGCAAGGTAGTTACACAGAC
TTGGGCAGTGAGTAAAGGGGTCTGTATTACATGCTCATTTCATCAAGGCTCTTTTAGGCC
TTCTAATACATGTGTGAGGAAAGTAAACTCAGTATTGCTATTCATCAGGTCACTGAAAGT
TTAAGTGACTCACTCAAGGCCACATGGAGGATGGTGACAGGGCTGCAGCAGAGCTGAGAG
TGAGCAGTAATGTGGTCTCATTATTGCCATCATTCCTTGAACTCCTACTGTGCTCACAGT
CCTCACCCTGGCAGGTTGTATCCTCTGTCAGAAGCTGTGACCTATTTTTAATGTTGCCTT
TTCAAGTGAAGAGATAATATTGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACATACATAAATCTGAAAGTGTCTTAGAGAAGGTAAAATGTGCAAGGTAGTTACACAGAC
TTGGGCAGTGAGTAAAGGGGTCTGTATTACATGCTCATTTCATCAAGGCTCTTTTAGGCC
TTCTAATACATGTGTGAGGAAAGTAAACTCAGTATTGCTATTCATCAGGTCACTGAAAGT
TTAAGTGACTCACTCAAGGCCACATGGAGGATGGTGACAGGGCTGCAGCAGAGCTGAGAG
TGAGCAGTAATGTGGTCTCATTATTGCCATCATTCCTTGAACTCCTACTGTGCTCACAGT
CCTCACCCTGGCAGGTTGTATCCTCTGTCAGAAGCTGTGACCTATTTTTAATGTTGCCTT
TTCAAGTGAAGAGATAATATTGAA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               16-225, gnl|bosTau2|chr7 (50955911-50956118)
               

               
               16-225, gnl|Hg17|chr5 (80884853-80884669)
               


               
               226-382, gnl|bosTau2|chr7 (50956156-50956311)
               

               
               226-382, gnl|Hg17|chr5 (80884631-80884483)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-225, gnl|bosTau2|chr7 (50955911-50956118)
               

               
               16-225, gnl|Hg17|chr5 (80884853-80884669)
               


               
               226-382, gnl|bosTau2|chr7 (50956156-50956311)
               

               
               226-382, gnl|Hg17|chr5 (80884631-80884483)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               aor (0.195274)
               

               
               ste (0.135208)
               

               
               tra (0.123092)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               ste (0.135208)
               

               
               tra (0.123092)

	16-225, gnl\|bosTau2\|chr7 (50955911-50956118)
	16-225, gnl\|Hg17\|chr5 (80884853-80884669)

	226-382, gnl\|bosTau2\|chr7 (50956156-50956311)
	226-382, gnl\|Hg17\|chr5 (80884631-80884483)