Ss1.1-rste11_c7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGAGGCCGAGCTTGCCCGAGTGGTGGCTTTCTGCCTGACTGGCTCCTGGGCCTGGACA AAGGAGACCCGGGCGGAGGCGGGGGCCTGCGGTTTCTGAAGCCGAAGAAGGCGGGCTCCG CAGTGGTGTGGGGGCTCTTTCCCTGATAGTTAAATTTATGTTCTGAGAGAAATCTTCTTT ACAGACAATAGGTGAGGAACAAACCCAGAATCCCTACACTGAACTGCTTGTGCTGAAAGC TCATCATGATATTGTACGATTTCTTGTACAGTTAGATGACTATAGATTTGCATCTGCTGG TGATGATGGAATTGTAGTTGTGTGGAATGCCCAGACAGGAGAAAAACTTTTGGAACTTAA TGGACATACTCAAAAGATAACAGCTATTACTACATTTCCTTCTTTGGAAGCTTGTGAAGA AAAAAATCAACTGATCTTGACAGCCTCTGCTGATAAAACAGTTATTGTATGGGATTGTGA TATTGGAAGACAAGTTCAGAAAGTGTCATGCTTCCAGTCTACTGTAAAGTGTTTAGCTGT TCTTCAGAGACTAGATGTTTGGCTCTCTGGTGGGAATGACTTGTGTGTATGGAACCGAAA TTTAGATCTCCTGTGTAAGACTGGTCACCTTTCTGATACAGGGATCAGTGCTTTGATTGA AATACCTAAGAACTGTGTTGTGGCCGCAGTTGGCAAAGAACTGATAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGAGGCCGAGCTTGCCCGAGTGGTGGCTTTCTGCCTGACTGGCTCCTGGGCCTGGACA AAGGAGACCCGGGCGGAGGCGGGGGCCTGCGGTTTCTGAAGCCGAAGAAGGCGGGCTCCG CAGTGGTGTGGGGGCTCTTTCCCTGATAGTTAAATTTATGTTCTGAGAGAAATCTTCTTT ACAGACAATAGGTGAGGAACAAACCCAGAATCCCTACACTGAACTGCTTGTGCTGAAAGC TCATCATGATATTGTACGATTTCTTGTACAGTTAGATGACTATAGATTTGCATCTGCTGG TGATGATGGAATTGTAGTTGTGTGGAATGCCCAGACAGGAGAAAAACTTTTGGAACTTAA TGGACATACTCAAAAGATAACAGCTATTACTACATTTCCTTCTTTGGAAGCTTGTGAAGA AAAAAATCAACTGATCTTGACAGCCTCTGCTGATAAAACAGTTATTGTATGGGATTGTGA TATTGGAAGACAAGTTCAGAAAGTGTCATGCTTCCAGTCTACTGTAAAGTGTTTAGCTGT TCTTCAGAGACTAGATGTTTGGCTCTCTGGTGGGAATGACTTGTGTGTATGGAACCGAAA TTTAGATCTCCTGTGTAAGACTGGTCACCTTTCTGATACAGGGATCAGTGCTTTGATTGA AATACCTAAGAACTGTGTTGTGGCCGCAGTTGGCAAAGAACTGATAAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 168-295, gnl|bosTau2|chr10 (2518419-2518292) | |
| 168-295, gnl|canFam2|chr3 (32132144-32132005) | |
| 168-295, gnl|dasNov1|scaffold_37220 (871-731) | |
| 168-295, gnl|echTel1|scaffold_299017 (3323-3186) | |
| 168-295, gnl|galGal2|chr13_random (276592-276728) | |
| 168-295, gnl|hg17|chr5 (76821025-76821164) | |
| 168-295, gnl|Hg17|chr5 (76821155-76821028) | |
| 168-295, gnl|loxAfr1|scaffold_52312 (8270-8131) | |
| 168-295, gnl|mm7|chr13 (92041646-92041507) | |
| 168-295, gnl|Mm7|chr13 (92041514-92041641) | |
| 168-295, gnl|monDom2|scaffold_27 (39048027-39047890) | |
| 168-295, gnl|oryCun1|scaffold_134314 (4620-4759) | |
| 168-295, gnl|panTro1|chr4 (38589195-38589056) | |
| 168-295, gnl|rheMac2|chr6 (73714293-73714434) | |
| 168-295, gnl|rn3|chr2 (25222526-25222388) | |
| 168-295, gnl|tetNig1|chrUn_random (1612384-1612506) | |
| 332-470, gnl|bosTau2|chr10 (2498611-2498473) | |
| 332-470, gnl|canFam2|chr3 (32144009-32143756) | |
| 332-470, gnl|dasNov1|scaffold_227135 (428-196) | |
| 332-470, gnl|galGal2|chr13_random (271204-271471) | |
| 332-470, gnl|hg17|chr5 (76794638-76794890) | |
| 332-470, gnl|Hg17|chr5 (76794810-76794672) | |
| 332-470, gnl|mm7|chr13 (92060264-92060031) | |
| 332-470, gnl|Mm7|chr13 (92060099-92060237) | |
| 332-470, gnl|monDom2|scaffold_27 (39079916-39079676) | |
| 332-470, gnl|oryCun1|scaffold_127146 (8377-8625) | |
| 332-470, gnl|panTro1|chr4 (38609199-38608947) | |
| 332-470, gnl|rheMac2|chr6 (73699633-73699885) | |
| 332-470, gnl|rn3|chr2 (25247542-25247305) | |
| 525-642, gnl|bosTau2|chr10 (2494700-2494583) | |
| 525-642, gnl|Hg17|chr5 (76785514-76785397) | |
| 525-642, gnl|Mm7|chr13 (92068772-92068889) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 168-295, gnl|bosTau2|chr10 (2518419-2518292) | |
| 168-295, gnl|canFam2|chr3 (32132144-32132005) | |
| 168-295, gnl|dasNov1|scaffold_37220 (871-731) | |
| 168-295, gnl|echTel1|scaffold_299017 (3323-3186) | |
| 168-295, gnl|galGal2|chr13_random (276592-276728) | |
| 168-295, gnl|hg17|chr5 (76821025-76821164) | |
| 168-295, gnl|Hg17|chr5 (76821155-76821028) | |
| 168-295, gnl|loxAfr1|scaffold_52312 (8270-8131) | |
| 168-295, gnl|mm7|chr13 (92041646-92041507) | |
| 168-295, gnl|Mm7|chr13 (92041514-92041641) | |
| 168-295, gnl|monDom2|scaffold_27 (39048027-39047890) | |
| 168-295, gnl|oryCun1|scaffold_134314 (4620-4759) | |
| 168-295, gnl|panTro1|chr4 (38589195-38589056) | |
| 168-295, gnl|rheMac2|chr6 (73714293-73714434) | |
| 168-295, gnl|rn3|chr2 (25222526-25222388) | |
| 168-295, gnl|tetNig1|chrUn_random (1612384-1612506) | |
| 332-470, gnl|bosTau2|chr10 (2498611-2498473) | |
| 332-470, gnl|canFam2|chr3 (32144009-32143756) | |
| 332-470, gnl|dasNov1|scaffold_227135 (428-196) | |
| 332-470, gnl|galGal2|chr13_random (271204-271471) | |
| 332-470, gnl|hg17|chr5 (76794638-76794890) | |
| 332-470, gnl|Hg17|chr5 (76794810-76794672) | |
| 332-470, gnl|mm7|chr13 (92060264-92060031) | |
| 332-470, gnl|Mm7|chr13 (92060099-92060237) | |
| 332-470, gnl|monDom2|scaffold_27 (39079916-39079676) | |
| 332-470, gnl|oryCun1|scaffold_127146 (8377-8625) | |
| 332-470, gnl|panTro1|chr4 (38609199-38608947) | |
| 332-470, gnl|rheMac2|chr6 (73699633-73699885) | |
| 332-470, gnl|rn3|chr2 (25247542-25247305) | |
| 525-642, gnl|bosTau2|chr10 (2494700-2494583) | |
| 525-642, gnl|Hg17|chr5 (76785514-76785397) | |
| 525-642, gnl|Mm7|chr13 (92068772-92068889) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ste (0.135208) | |
| eep (0.122564) | |
| cty (0.10408) |