Non-Coding RNA Search

Ss1.1-rste13_m12.5

Sequence:


               
               GGAAGCAGAGTGTGGGCCTGAGCTGGTCAAGCAGGCAGCAGAAGGGATACTTGCTGGATC
TCTAGGAGCTGCCGGCCCTGGGACTCCACGATTTGGTGATTCTGCATCAGCTCTGTCCAA
TAAGGTAACCACTAGCCACGTGCGGCTGTGCCCTTTTGAAATGTAGTGTAGGGACCTATT
TGGAACCCCAGAGTTGGCATGAAGGTTATTTTAAGCTGAAGACGTTTGAGATTCAACAGA
TGCGGAAAAAAGCCGCCTGGGAGCTTCCCTTATCTGACGAAAAGCAGTAACTTCTGGGAA
ATGAGGCTACCATAAATCCCCTCTCCAGGGGAGTTTCATGGCCCTAAAGAAGAGGAGAGG
CCATTCATACCTGTATAGACAAATTTTAATCACAATCTTTCTTATTCTGTCGCTTCTCAT
AAAAACCCATTTATAATTCCTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAGCAGAGTGTGGGCCTGAGCTGGTCAAGCAGGCAGCAGAAGGGATACTTGCTGGATC
TCTAGGAGCTGCCGGCCCTGGGACTCCACGATTTGGTGATTCTGCATCAGCTCTGTCCAA
TAAGGTAACCACTAGCCACGTGCGGCTGTGCCCTTTTGAAATGTAGTGTAGGGACCTATT
TGGAACCCCAGAGTTGGCATGAAGGTTATTTTAAGCTGAAGACGTTTGAGATTCAACAGA
TGCGGAAAAAAGCCGCCTGGGAGCTTCCCTTATCTGACGAAAAGCAGTAACTTCTGGGAA
ATGAGGCTACCATAAATCCCCTCTCCAGGGGAGTTTCATGGCCCTAAAGAAGAGGAGAGG
CCATTCATACCTGTATAGACAAATTTTAATCACAATCTTTCTTATTCTGTCGCTTCTCAT
AAAAACCCATTTATAATTCCTAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               153-444, gnl|bosTau2|chr6 (11203124-11203410)
               

               
               153-444, gnl|Hg17|chr4 (98094291-98094571)
               

               
               153-444, gnl|Mm7|chr3 (140152857-140152569)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               153-444, gnl|bosTau2|chr6 (11203124-11203410)
               

               
               153-444, gnl|Hg17|chr4 (98094291-98094571)
               

               
               153-444, gnl|Mm7|chr3 (140152857-140152569)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ste (0.135208)
               

               
               bla (0.124347)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)
               

               
               bla (0.124347)

	153-444, gnl\|bosTau2\|chr6 (11203124-11203410)
	153-444, gnl\|Hg17\|chr4 (98094291-98094571)
	153-444, gnl\|Mm7\|chr3 (140152857-140152569)