Ss1.1-rste17_j23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCTCTTCATGCTCTGCATGTTTGGATACCTTATATTTATGATTGTCTATAAGTGGCTGG TTTATTCAGCAGAAACCTCCAGAGTTGCTCCTAGCATTCTGATTGAGTTCATTAACATGT TTTTATTCCCGGCTAGTGAAACGAGTGGTCTTTATCCAGGGCAGGAGCACGTCCAGAGGC TGCTGCTGGTCGTCACGGCACTGTCTGTCCCCGTACTCTTCTTGGGAAAGCCACTCTTTT TGTGGTGGCTACACAATGGACGCAGTTGCTTTGGGGTCAGCAGGAGTGGTTACACACTTA TAAGGAAAGATAGCGAAGAAGAGGTGTCTTTGCTGGGAAGCCAAGACATAGAAGAGGGAA GCAACCAAATGGAAGATGGACGCAGAGAGGTGACGTGTGAAGAGTTTAATTTTGGAGAAA TATTAATGACCCAAGTAATCCATTCCATCGAATACTGTCTGGGCTGCATCTCCAACACTG CTTCGTACCTGAGGCTCTGGGCGCTCAGTTTGGCTCACGCACAGTTATCTGACGTCCTGT GGGCCATGCTGATGCGCGTGGGGCTCCGCGTAGACACGGTTTATGGGGTCTTTCTGCTGC TCCCGGTGATTGCGCTGTTTGCAGTTTTGACAATTTTCATCCTTTTGATCATGGAAGGGC TTTCTGCATTTCTTCACGCCATACGCCTCCACTGGGTTGAATTTCAGAACAAATTCTACA TTGGTGCAGGCACCAAATTTGTTCCTTTTTCATTCAGATTACTTTCTTCGAAGTTCAGTG ACAACGTGGCATGATCATATTGCCACGTCCAAGAAGTTCCAGATTAATGGAGAATTATCA TGTTACAGAATTTCACTCATGTTAAACTGATGATAGGAAAACTTCCATCTTCATTGATTG CCTTATGAGATAGCCAAATACTTCTGTAAGATATACCTCTTCCTCATAAGTTAAATATTT TGTAAAGTTTCTCAATTTCAGATATATAAATTTCTTTCAGTTTTTATGATGAGCAAATGG AAGTTAATGCCAAAAAGTTAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCTCTTCATGCTCTGCATGTTTGGATACCTTATATTTATGATTGTCTATAAGTGGCTGG TTTATTCAGCAGAAACCTCCAGAGTTGCTCCTAGCATTCTGATTGAGTTCATTAACATGT TTTTATTCCCGGCTAGTGAAACGAGTGGTCTTTATCCAGGGCAGGAGCACGTCCAGAGGC TGCTGCTGGTCGTCACGGCACTGTCTGTCCCCGTACTCTTCTTGGGAAAGCCACTCTTTT TGTGGTGGCTACACAATGGACGCAGTTGCTTTGGGGTCAGCAGGAGTGGTTACACACTTA TAAGGAAAGATAGCGAAGAAGAGGTGTCTTTGCTGGGAAGCCAAGACATAGAAGAGGGAA GCAACCAAATGGAAGATGGACGCAGAGAGGTGACGTGTGAAGAGTTTAATTTTGGAGAAA TATTAATGACCCAAGTAATCCATTCCATCGAATACTGTCTGGGCTGCATCTCCAACACTG CTTCGTACCTGAGGCTCTGGGCGCTCAGTTTGGCTCACGCACAGTTATCTGACGTCCTGT GGGCCATGCTGATGCGCGTGGGGCTCCGCGTAGACACGGTTTATGGGGTCTTTCTGCTGC TCCCGGTGATTGCGCTGTTTGCAGTTTTGACAATTTTCATCCTTTTGATCATGGAAGGGC TTTCTGCATTTCTTCACGCCATACGCCTCCACTGGGTTGAATTTCAGAACAAATTCTACA TTGGTGCAGGCACCAAATTTGTTCCTTTTTCATTCAGATTACTTTCTTCGAAGTTCAGTG ACAACGTGGCATGATCATATTGCCACGTCCAAGAAGTTCCAGATTAATGGAGAATTATCA TGTTACAGAATTTCACTCATGTTAAACTGATGATAGGAAAACTTCCATCTTCATTGATTG CCTTATGAGATAGCCAAATACTTCTGTAAGATATACCTCTTCCTCATAAGTTAAATATTT TGTAAAGTTTCTCAATTTCAGATATATAAATTTCTTTCAGTTTTTATGATGAGCAAATGG AAGTTAATGCCAAAAAGTTAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 3-165, gnl|bosTau2|chr17 (26727041-26727203) | |
| 3-165, gnl|canFam2|chr26 (8937442-8937230) | |
| 3-165, gnl|danRer3|chr5 (14547310-14547128) | |
| 3-165, gnl|dasNov1|scaffold_23588 (2512-2722) | |
| 3-165, gnl|echTel1|scaffold_311032 (47993-47779) | |
| 3-165, gnl|fr1|chrUn (2007087-2007292) | |
| 3-165, gnl|galGal2|chr15 (4882067-4881850) | |
| 3-165, gnl|hg17|chr12 (122757973-122758183) | |
| 3-165, gnl|Hg17|chr12 (122758051-122758213) | |
| 3-165, gnl|loxAfr1|scaffold_1248 (98394-98603) | |
| 3-165, gnl|mm7|chr5 (123950529-123950711) | |
| 3-165, gnl|Mm7|chr5 (123950579-123950741) | |
| 3-165, gnl|monDom2|scaffold_97 (4238960-4239172) | |
| 3-165, gnl|oryCun1|scaffold_103098 (1165-1377) | |
| 3-165, gnl|panTro1|chr10 (125813073-125813283) | |
| 3-165, gnl|rheMac2|chr11 (125047679-125047889) | |
| 3-165, gnl|rn3|chr12 (32930570-32930377) | |
| 3-165, gnl|tetNig1|chr12 (6582781-6582965) | |
| 3-165, gnl|xenTro1|scaffold_100 (2306727-2306932) | |
| 403-522, gnl|bosTau2|chr17 (26732303-26732422) | |
| 403-522, gnl|canFam2|chr26 (8931389-8931237) | |
| 403-522, gnl|danRer3|chr5 (14543267-14543131) | |
| 403-522, gnl|dasNov1|scaffold_23588 (8604-8756) | |
| 403-522, gnl|echTel1|scaffold_311032 (45957-45807) | |
| 403-522, gnl|fr1|chrUn (2007830-2007963) | |
| 403-522, gnl|galGal2|chr15 (4879703-4879571) | |
| 403-522, gnl|hg17|chr12 (122763827-122763979) | |
| 403-522, gnl|Hg17|chr12 (122763845-122763964) | |
| 403-522, gnl|loxAfr1|scaffold_1248 (103181-103333) | |
| 403-522, gnl|mm7|chr5 (123953254-123953403) | |
| 403-522, gnl|Mm7|chr5 (123953272-123953391) | |
| 403-522, gnl|monDom2|scaffold_97 (4245368-4245525) | |
| 403-522, gnl|oryCun1|scaffold_92206 (4969-5116) | |
| 403-522, gnl|panTro1|chr10 (125818855-125819007) | |
| 403-522, gnl|rheMac2|chr11 (125053446-125053598) | |
| 403-522, gnl|rn3|chr12 (32927684-32927536) | |
| 403-522, gnl|tetNig1|chr12 (6583478-6583611) | |
| 403-522, gnl|xenTro1|scaffold_100 (2311414-2311569) | |
| 694-1040, gnl|bosTau2|chr17 (26735227-26735563) | |
| 694-1040, gnl|Hg17|chr12 (122767353-122767710) | |
| 694-1040, gnl|Mm7|chr5 (123955922-123956278) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-165, gnl|bosTau2|chr17 (26727041-26727203) | |
| 3-165, gnl|canFam2|chr26 (8937442-8937230) | |
| 3-165, gnl|danRer3|chr5 (14547310-14547128) | |
| 3-165, gnl|dasNov1|scaffold_23588 (2512-2722) | |
| 3-165, gnl|echTel1|scaffold_311032 (47993-47779) | |
| 3-165, gnl|fr1|chrUn (2007087-2007292) | |
| 3-165, gnl|galGal2|chr15 (4882067-4881850) | |
| 3-165, gnl|hg17|chr12 (122757973-122758183) | |
| 3-165, gnl|Hg17|chr12 (122758051-122758213) | |
| 3-165, gnl|loxAfr1|scaffold_1248 (98394-98603) | |
| 3-165, gnl|mm7|chr5 (123950529-123950711) | |
| 3-165, gnl|Mm7|chr5 (123950579-123950741) | |
| 3-165, gnl|monDom2|scaffold_97 (4238960-4239172) | |
| 3-165, gnl|oryCun1|scaffold_103098 (1165-1377) | |
| 3-165, gnl|panTro1|chr10 (125813073-125813283) | |
| 3-165, gnl|rheMac2|chr11 (125047679-125047889) | |
| 3-165, gnl|rn3|chr12 (32930570-32930377) | |
| 3-165, gnl|tetNig1|chr12 (6582781-6582965) | |
| 3-165, gnl|xenTro1|scaffold_100 (2306727-2306932) | |
| 403-522, gnl|bosTau2|chr17 (26732303-26732422) | |
| 403-522, gnl|canFam2|chr26 (8931389-8931237) | |
| 403-522, gnl|danRer3|chr5 (14543267-14543131) | |
| 403-522, gnl|dasNov1|scaffold_23588 (8604-8756) | |
| 403-522, gnl|echTel1|scaffold_311032 (45957-45807) | |
| 403-522, gnl|fr1|chrUn (2007830-2007963) | |
| 403-522, gnl|galGal2|chr15 (4879703-4879571) | |
| 403-522, gnl|hg17|chr12 (122763827-122763979) | |
| 403-522, gnl|Hg17|chr12 (122763845-122763964) | |
| 403-522, gnl|loxAfr1|scaffold_1248 (103181-103333) | |
| 403-522, gnl|mm7|chr5 (123953254-123953403) | |
| 403-522, gnl|Mm7|chr5 (123953272-123953391) | |
| 403-522, gnl|monDom2|scaffold_97 (4245368-4245525) | |
| 403-522, gnl|oryCun1|scaffold_92206 (4969-5116) | |
| 403-522, gnl|panTro1|chr10 (125818855-125819007) | |
| 403-522, gnl|rheMac2|chr11 (125053446-125053598) | |
| 403-522, gnl|rn3|chr12 (32927684-32927536) | |
| 403-522, gnl|tetNig1|chr12 (6583478-6583611) | |
| 403-522, gnl|xenTro1|scaffold_100 (2311414-2311569) | |
| 694-1040, gnl|bosTau2|chr17 (26735227-26735563) | |
| 694-1040, gnl|Hg17|chr12 (122767353-122767710) | |
| 694-1040, gnl|Mm7|chr5 (123955922-123956278) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ste (0.270416) |