Ss1.1-rste19_c2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTAAGCTACACAGACTGTACTTTATTAGCTTGTTAATGGGAGGCACTACAAATCAGCGAG AGGCATTACAATATGCTAAAAATTTTCAGCCATTTGCCCTAAATCATCAAAAAGACATTC AGGTTTTGATGGGAAGCCTCGTGTACCTGAGACAAGGGATTGAGAACTCACCGTATGTTC ACCTGCTTGATGCAAACCAGTGGGCTGACATCTGTGACATCTTCACACGGGATGCCTGTG CCCTTCTGGGGCTCTCTGTGGAGTCCCCACTCAGCGTCAGTTTCTCTGCAGGTTGTGTGG CGCTGCCAGCTTTAATTAATATCAAAGCTGTGATTGAACAGAGGCAGTGCACTGGAGTTT GGAACCAGAAAGATGAACTACCCATTGAAGTGGACCTTGGTAAAAAGTGCTGGTATCACT CGATATTTGCCTGTCCTATTCTTCGTCAGCAAACAACAGATAACAATCCACCCATGAAAT TGGTCTGTGGTCATATTATATCAAGAGATGCCCTGAATAAAATGTTTAATGGTAGCAAAT TAAAATGTCCATATTGCCCAATGGAACAAAGTCCAGGAGATGCCAAACAGATATTTTTCT GAAGAAATAACTCTAGTTTGCAATTTGTAAGTGAAACTGAATCGAGGGCGCATTTCAGAA GAGAACGTTCCATTTAATGCAGCTAACCAAGGACTCCCATGTTTATATAAGCTAATGCTC CAGAAACTTTGCCAACATTTTAGTGTGTACACACGGAGGGGAGTGTGCTCCAGATAAATA TTATCATAGGGCTTTATTATATTCTTGGTCTTCATTTCTGATCAAGTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTAAGCTACACAGACTGTACTTTATTAGCTTGTTAATGGGAGGCACTACAAATCAGCGAG AGGCATTACAATATGCTAAAAATTTTCAGCCATTTGCCCTAAATCATCAAAAAGACATTC AGGTTTTGATGGGAAGCCTCGTGTACCTGAGACAAGGGATTGAGAACTCACCGTATGTTC ACCTGCTTGATGCAAACCAGTGGGCTGACATCTGTGACATCTTCACACGGGATGCCTGTG CCCTTCTGGGGCTCTCTGTGGAGTCCCCACTCAGCGTCAGTTTCTCTGCAGGTTGTGTGG CGCTGCCAGCTTTAATTAATATCAAAGCTGTGATTGAACAGAGGCAGTGCACTGGAGTTT GGAACCAGAAAGATGAACTACCCATTGAAGTGGACCTTGGTAAAAAGTGCTGGTATCACT CGATATTTGCCTGTCCTATTCTTCGTCAGCAAACAACAGATAACAATCCACCCATGAAAT TGGTCTGTGGTCATATTATATCAAGAGATGCCCTGAATAAAATGTTTAATGGTAGCAAAT TAAAATGTCCATATTGCCCAATGGAACAAAGTCCAGGAGATGCCAAACAGATATTTTTCT GAAGAAATAACTCTAGTTTGCAATTTGTAAGTGAAACTGAATCGAGGGCGCATTTCAGAA GAGAACGTTCCATTTAATGCAGCTAACCAAGGACTCCCATGTTTATATAAGCTAATGCTC CAGAAACTTTGCCAACATTTTAGTGTGTACACACGGAGGGGAGTGTGCTCCAGATAAATA TTATCATAGGGCTTTATTATATTCTTGGTCTTCATTTCTGATCAAGTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 113-280, gnl|bosTau2|chr11 (35450255-35450422) | |
| 113-280, gnl|canFam2|chr17 (41484042-41483902) | |
| 113-280, gnl|danRer3|chrNA (225385142-225385282) | |
| 113-280, gnl|dasNov1|scaffold_24155 (8739-8879) | |
| 113-280, gnl|echTel1|scaffold_317214 (83200-83060) | |
| 113-280, gnl|fr1|chrUn (109746108-109746244) | |
| 113-280, gnl|galGal2|chr4 (85743071-85743209) | |
| 113-280, gnl|hg17|chr2 (86904635-86904775) | |
| 113-280, gnl|Hg17|chr2 (86904638-86904805) | |
| 113-280, gnl|loxAfr1|scaffold_24394 (15938-16078) | |
| 113-280, gnl|mm7|chr6 (71416464-71416324) | |
| 113-280, gnl|Mm7|chr6 (71416459-71416292) | |
| 113-280, gnl|monDom2|scaffold_63 (1013172-1013312) | |
| 113-280, gnl|oryCun1|scaffold_172507 (4490-4630) | |
| 113-280, gnl|panTro1|chr12 (89782994-89783134) | |
| 113-280, gnl|rheMac2|chr6 (174712921-174713061) | |
| 113-280, gnl|rn3|chr4 (104854990-104854850) | |
| 113-280, gnl|tetNig1|chr1 (2452331-2452470) | |
| 113-280, gnl|xenTro1|scaffold_149 (711086-711226) | |
| 384-538, gnl|bosTau2|chr11 (35455378-35455532) | |
| 384-538, gnl|Hg17|chr2 (86910339-86910493) | |
| 384-538, gnl|Mm7|chr6 (71412710-71412556) | |
| 539-828, gnl|bosTau2|chr11 (35456378-35456665) | |
| 539-828, gnl|Hg17|chr2 (86912129-86912416) | |
| 539-828, gnl|Mm7|chr6 (71411119-71410847) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 113-280, gnl|bosTau2|chr11 (35450255-35450422) | |
| 113-280, gnl|canFam2|chr17 (41484042-41483902) | |
| 113-280, gnl|danRer3|chrNA (225385142-225385282) | |
| 113-280, gnl|dasNov1|scaffold_24155 (8739-8879) | |
| 113-280, gnl|echTel1|scaffold_317214 (83200-83060) | |
| 113-280, gnl|fr1|chrUn (109746108-109746244) | |
| 113-280, gnl|galGal2|chr4 (85743071-85743209) | |
| 113-280, gnl|hg17|chr2 (86904635-86904775) | |
| 113-280, gnl|Hg17|chr2 (86904638-86904805) | |
| 113-280, gnl|loxAfr1|scaffold_24394 (15938-16078) | |
| 113-280, gnl|mm7|chr6 (71416464-71416324) | |
| 113-280, gnl|Mm7|chr6 (71416459-71416292) | |
| 113-280, gnl|monDom2|scaffold_63 (1013172-1013312) | |
| 113-280, gnl|oryCun1|scaffold_172507 (4490-4630) | |
| 113-280, gnl|panTro1|chr12 (89782994-89783134) | |
| 113-280, gnl|rheMac2|chr6 (174712921-174713061) | |
| 113-280, gnl|rn3|chr4 (104854990-104854850) | |
| 113-280, gnl|tetNig1|chr1 (2452331-2452470) | |
| 113-280, gnl|xenTro1|scaffold_149 (711086-711226) | |
| 384-538, gnl|bosTau2|chr11 (35455378-35455532) | |
| 384-538, gnl|Hg17|chr2 (86910339-86910493) | |
| 384-538, gnl|Mm7|chr6 (71412710-71412556) | |
| 539-828, gnl|bosTau2|chr11 (35456378-35456665) | |
| 539-828, gnl|Hg17|chr2 (86912129-86912416) | |
| 539-828, gnl|Mm7|chr6 (71411119-71410847) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| sme (0.305437) | |
| ste (0.270416) | |
| tes (0.207814) | |
| ssp (0.13552) | |
| med (0.116252) | |
| cbl (0.114797) | |
| ldo (0.0970026) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sme (0.305437) | |
| ste (0.270416) | |
| tes (0.207814) | |
| ssp (0.13552) | |
| med (0.116252) | |
| cbl (0.114797) | |
| ldo (0.0970026) |