Ss1.1-rste20_b10.5
|
GGCATGTTTGGCGTGGTCAGTCTGTTACCAGTTTCAGCTCTTCGCCTGTTTATTCAGAAA
GTATTTGGACTCGTGTGTACGGGGTATAGTTCCTGGAAGGCATTGCAATTTCACGGGTCC
TACCTGTTTGGCTGAGAAATGAGAAGAGGCAAGTCAGGAAGATGAAACAAAGCTCTCCAC
ATGCTTCACCTGGATGCTGAAGAGCGCAGGAGTGAACACATGATGGGCAGAGTGAGAGCA
GCTACTTCTCTGGGAGGAAACTGGCACAGAAAAGGTGACCTTGCCTAGGTGTTCAAGTGG
CCAAGGAGAAGATGGAAATTCTAGGCAATTCAACTTGCAGAGGCCAGAGCTAAACATTAC
ATGGGTTGATGTTAGATGCTCAGGAACTGGAAATCTGCCCCATGGGAGAAATGAAGGACA
AAGGAGCACAAGAGTTAAGGATATTGAAAGAAAACAGATGAAGTGCTGGTGCCTAAAATC
TAAAAGACAAAAACACATTTTTTTTTAAAAAGACAGACAATGGCTATTTCTATGTATTGA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGCATGTTTGGCGTGGTCAGTCTGTTACCAGTTTCAGCTCTTCGCCTGTTTATTCAGAAA
GTATTTGGACTCGTGTGTACGGGGTATAGTTCCTGGAAGGCATTGCAATTTCACGGGTCC
TACCTGTTTGGCTGAGAAATGAGAAGAGGCAAGTCAGGAAGATGAAACAAAGCTCTCCAC
ATGCTTCACCTGGATGCTGAAGAGCGCAGGAGTGAACACATGATGGGCAGAGTGAGAGCA
GCTACTTCTCTGGGAGGAAACTGGCACAGAAAAGGTGACCTTGCCTAGGTGTTCAAGTGG
CCAAGGAGAAGATGGAAATTCTAGGCAATTCAACTTGCAGAGGCCAGAGCTAAACATTAC
ATGGGTTGATGTTAGATGCTCAGGAACTGGAAATCTGCCCCATGGGAGAAATGAAGGACA
AAGGAGCACAAGAGTTAAGGATATTGAAAGAAAACAGATGAAGTGCTGGTGCCTAAAATC
TAAAAGACAAAAACACATTTTTTTTTAAAAAGACAGACAATGGCTATTTCTATGTATTGA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
67-192, gnl|bosTau2|chr10 (34659036-34659161) |
|
67-192, gnl|canFam2|chr30 (25840807-25841497) |
|
67-192, gnl|dasNov1|scaffold_2670 (46262-46942) |
|
67-192, gnl|echTel1|scaffold_312756 (254822-254168) |
|
67-192, gnl|hg17|chr15 (55763737-55764448) |
|
67-192, gnl|Hg17|chr15 (55763956-55763826) |
|
67-192, gnl|mm7|chr9 (71540215-71539589) |
|
67-192, gnl|Mm7|chr9 (71540014-71540135) |
|
67-192, gnl|monDom2|scaffold_12 (35549658-35550404) |
|
67-192, gnl|oryCun1|scaffold_201726 (138585-137878) |
|
67-192, gnl|panTro1|chr16 (56114483-56115194) |
|
67-192, gnl|rheMac2|chr7 (36017251-36017957) |
|
67-192, gnl|rn3|chr8 (75991063-75990439) |
| |
|
341-540, gnl|bosTau2|chr10 (34678205-34678406) |
|
341-540, gnl|Hg17|chr15 (55753822-55753588) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
67-192, gnl|bosTau2|chr10 (34659036-34659161) |
|
67-192, gnl|canFam2|chr30 (25840807-25841497) |
|
67-192, gnl|dasNov1|scaffold_2670 (46262-46942) |
|
67-192, gnl|echTel1|scaffold_312756 (254822-254168) |
|
67-192, gnl|hg17|chr15 (55763737-55764448) |
|
67-192, gnl|Hg17|chr15 (55763956-55763826) |
|
67-192, gnl|mm7|chr9 (71540215-71539589) |
|
67-192, gnl|Mm7|chr9 (71540014-71540135) |
|
67-192, gnl|monDom2|scaffold_12 (35549658-35550404) |
|
67-192, gnl|oryCun1|scaffold_201726 (138585-137878) |
|
67-192, gnl|panTro1|chr16 (56114483-56115194) |
|
67-192, gnl|rheMac2|chr7 (36017251-36017957) |
|
67-192, gnl|rn3|chr8 (75991063-75990439) |
| |
|
341-540, gnl|bosTau2|chr10 (34678205-34678406) |
|
341-540, gnl|Hg17|chr15 (55753822-55753588) |
|
ssp (0.271039) |
|
ste (0.135208) |
|
pgl (0.118483) |
|
spc (0.113366) |
|
ssp (0.271039) |
|
ste (0.135208) |
|
pgl (0.118483) |
|
spc (0.113366) |