Non-Coding RNA Search

Ss1.1-rste22_a24.5

Sequence:


               
               CCGCCGCGACCCCAGCCGAGCCCGCGGCCCAGCCTTAAGCCCCCAACCCCGGGGGCTGGC
ATGAGCGGCCCTTCGGCGGCGCCGGGGGGCGGGGGAGCCGCTGCCGCCTGAGCCCCGGCC
TGCCACTCGACCCCACGTCGCTGACCGGGGCTGACCGCAGAGCGTGCGAAGGACCCCGCC
GCTGCTTTCTTCCTCCCCTAGATCACACACCCCAACCCCAGAAGATGGGGAACTGCCTCA
AATCCCCCACTTCAGATGACATCTCCCTGCTTCACGAGTCTCAGTCCGACCGGGCTAGCT
TTGGCGAGGGGACGGAGCCGGATCAGGAGCCGCCGCCGCCATATCAGGAACAAGTTCCAG
TTCCGGTCTATCATCCAACACCTAGCCAGACTCGCCTAGCAACTCAGCTGACTGAAGAGG
AACAAATTAGGATAGCTCAAAGAATAGGCCTTATACAGCATCTGCCTAAAGGAGTTTATG
ACCCTGGAAGAGATGGATCAGAAAAAAAGATCCGGGAGTGTGTGATCTGTATGATGGACT
TTGTTTATGGGGACCCAATTCGATTTCTGCCGTGCATGCACATCTATCACCTGGACTGTA
TAGATGACTGGTTGATGAGATCCTTCACGTGCCCCTCCTGCATGGAGCCAGTTGATGCAG
CACTGCTTTCATCCTACGAGACTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGCCGCGACCCCAGCCGAGCCCGCGGCCCAGCCTTAAGCCCCCAACCCCGGGGGCTGGC
ATGAGCGGCCCTTCGGCGGCGCCGGGGGGCGGGGGAGCCGCTGCCGCCTGAGCCCCGGCC
TGCCACTCGACCCCACGTCGCTGACCGGGGCTGACCGCAGAGCGTGCGAAGGACCCCGCC
GCTGCTTTCTTCCTCCCCTAGATCACACACCCCAACCCCAGAAGATGGGGAACTGCCTCA
AATCCCCCACTTCAGATGACATCTCCCTGCTTCACGAGTCTCAGTCCGACCGGGCTAGCT
TTGGCGAGGGGACGGAGCCGGATCAGGAGCCGCCGCCGCCATATCAGGAACAAGTTCCAG
TTCCGGTCTATCATCCAACACCTAGCCAGACTCGCCTAGCAACTCAGCTGACTGAAGAGG
AACAAATTAGGATAGCTCAAAGAATAGGCCTTATACAGCATCTGCCTAAAGGAGTTTATG
ACCCTGGAAGAGATGGATCAGAAAAAAAGATCCGGGAGTGTGTGATCTGTATGATGGACT
TTGTTTATGGGGACCCAATTCGATTTCTGCCGTGCATGCACATCTATCACCTGGACTGTA
TAGATGACTGGTTGATGAGATCCTTCACGTGCCCCTCCTGCATGGAGCCAGTTGATGCAG
CACTGCTTTCATCCTACGAGACTA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5T7R8_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5T7R8_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               486-669, gnl|bosTau2|chr13 (39996303-39996486)
               

               
               486-669, gnl|Hg17|chr1 (51448838-51448995)
               

               
               486-669, gnl|Mm7|chr4 (108830868-108830710)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               486-669, gnl|bosTau2|chr13 (39996303-39996486)
               

               
               486-669, gnl|Hg17|chr1 (51448838-51448995)
               

               
               486-669, gnl|Mm7|chr4 (108830868-108830710)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               pgl (0.236967)
               

               
               fty (0.17584)
               

               
               nje (0.16592)
               

               
               ste (0.135208)
               

               
               nmm (0.132802)
               

               
               eru (0.120048)
               

               
               ldo (0.0970026)

Expressed library(ies): 7 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.236967)
               

               
               fty (0.17584)
               

               
               nje (0.16592)
               

               
               ste (0.135208)
               

               
               nmm (0.132802)
               

               
               eru (0.120048)
               

               
               ldo (0.0970026)

	486-669, gnl\|bosTau2\|chr13 (39996303-39996486)
	486-669, gnl\|Hg17\|chr1 (51448838-51448995)
	486-669, gnl\|Mm7\|chr4 (108830868-108830710)

	pgl (0.236967)
	fty (0.17584)
	nje (0.16592)
	ste (0.135208)
	nmm (0.132802)
	eru (0.120048)
	ldo (0.0970026)