Non-Coding RNA Search

Ss1.1-rste23_k1.5

Sequence:


               
               CTGGAGAGAAACCTTATGAATGTGTTAAATGTGGGAAGACCTTCAGCTGTAGTTCAAACC
TTACTGTACATC------------------------------------------------
------------AAGGTTCAAATCTTACTGCCCATCAGAGAGTACATAATGGAGAGAAAC
CCAGTAGTACAATAAGTGTGGAAAAGCCTGTAGGCCATGTGAATCACTATACATGTGAAA
GATCATATAAGAGAGAAATTGTATAAATGCAGTTATTTGTCATAATATATTGTAGCCTCA
TATCTTCTTTGATTCATCATCAGAAAATTTTTACTGGAGAAAATTTATGAATGTAACGAA
TATGAGAAAGTTCTTTAGCAATGATATAAGCCTTATTGTCTATCACAGTTCACACTGTGG
AGAGACTATATGAAGGCAATAAATGTGGGAAAGCCTTTAGCATTAGTCCCTTAATTGACA
TAAGCAAATCCACACTGGAGAAAAACCCTTTACATGTGACTAAAATGGGAAAGACATTAG
GCACTATGAATCTTGAAACATTAAACACAGGAGAGAAGCAACATGAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGAGAGAAACCTTATGAATGTGTTAAATGTGGGAAGACCTTCAGCTGTAGTTCAAACC
TTACTGTACATC------------------------------------------------
------------AAGGTTCAAATCTTACTGCCCATCAGAGAGTACATAATGGAGAGAAAC
CCAGTAGTACAATAAGTGTGGAAAAGCCTGTAGGCCATGTGAATCACTATACATGTGAAA
GATCATATAAGAGAGAAATTGTATAAATGCAGTTATTTGTCATAATATATTGTAGCCTCA
TATCTTCTTTGATTCATCATCAGAAAATTTTTACTGGAGAAAATTTATGAATGTAACGAA
TATGAGAAAGTTCTTTAGCAATGATATAAGCCTTATTGTCTATCACAGTTCACACTGTGG
AGAGACTATATGAAGGCAATAAATGTGGGAAAGCCTTTAGCATTAGTCCCTTAATTGACA
TAAGCAAATCCACACTGGAGAAAAACCCTTTACATGTGACTAAAATGGGAAAGACATTAG
GCACTATGAATCTTGAAACATTAAACACAGGAGAGAAGCAACATGAGT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               73-521, gnl|bosTau2|chr18 (40323998-40323557)
               

               
               73-521, gnl|Hg17|chr19 (39725287-39724889)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               73-521, gnl|bosTau2|chr18 (40323998-40323557)
               

               
               73-521, gnl|Hg17|chr19 (39725287-39724889)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ste (0.135208)
               

               
               tra (0.123092)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)
               

               
               tra (0.123092)

	73-521, gnl\|bosTau2\|chr18 (40323998-40323557)
	73-521, gnl\|Hg17\|chr19 (39725287-39724889)