Non-Coding RNA Search

Ss1.1-rste23_n14.5

Sequence:


               
               GAAAGGCGCTGAGAACCATGGAAACACCAGCCCTTACTTGGTAATATAGTTTCTGTATTT
TTCTCTATGTGCCTTCATTCTGACTCCCTGTTTCTTCACACTTTCTTTCCTGCCTTAAGA
ATAGTTTATTTTGTGCCTTAAAGATTCTTTGGTTTTCTTCTGGCAGCAGTAGTAAGAACA
CTGGTTTCTCTTTTTCCCTGAAGGTCTACTTATACTGTGTTAAGTTGCCACTGGCTGTAG
GCCTAGGAGTCTGAGAATGCACTTGATTCTGGGTCAAACTGCAAGAAGAATGACTTTCCA
CTTTTGTCCAGGGAGTATAGATATCTGGGTTGGAAATTGACTCTTCTATTTCCTTTTAGC
AAACAAAGGAAGCTTAGCAATCATACCATAACTTTGTTGTTTACAGTGGTGCTGATTGAG
GAGTGAGTGTGTCTCGAACTGAAATGACCTTACTGTATAACCTGGCATGGAAAAAATGGA
CTAGCCAGGAAATTCCATCCATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAGGCGCTGAGAACCATGGAAACACCAGCCCTTACTTGGTAATATAGTTTCTGTATTT
TTCTCTATGTGCCTTCATTCTGACTCCCTGTTTCTTCACACTTTCTTTCCTGCCTTAAGA
ATAGTTTATTTTGTGCCTTAAAGATTCTTTGGTTTTCTTCTGGCAGCAGTAGTAAGAACA
CTGGTTTCTCTTTTTCCCTGAAGGTCTACTTATACTGTGTTAAGTTGCCACTGGCTGTAG
GCCTAGGAGTCTGAGAATGCACTTGATTCTGGGTCAAACTGCAAGAAGAATGACTTTCCA
CTTTTGTCCAGGGAGTATAGATATCTGGGTTGGAAATTGACTCTTCTATTTCCTTTTAGC
AAACAAAGGAAGCTTAGCAATCATACCATAACTTTGTTGTTTACAGTGGTGCTGATTGAG
GAGTGAGTGTGTCTCGAACTGAAATGACCTTACTGTATAACCTGGCATGGAAAAAATGGA
CTAGCCAGGAAATTCCATCCATTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-504, gnl|bosTau2|chr3 (27588640-27589145)
               

               
               1-504, gnl|Hg17|chr1 (112795482-112794979)
               

               
               1-504, gnl|Mm7|chr3 (104721169-104721874)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-504, gnl|bosTau2|chr3 (27588640-27589145)
               

               
               1-504, gnl|Hg17|chr1 (112795482-112794979)
               

               
               1-504, gnl|Mm7|chr3 (104721169-104721874)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tbr (0.154178)
               

               
               ste (0.135208)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)
               

               
               ste (0.135208)

	1-504, gnl\|bosTau2\|chr3 (27588640-27589145)
	1-504, gnl\|Hg17\|chr1 (112795482-112794979)
	1-504, gnl\|Mm7\|chr3 (104721169-104721874)