Ss1.1-rste25_h4.5
|
AGGTGACATGTAGCGGAGGGCCCAGGATAGTTTATTCTTCTAGGGCCAGCAGAAAAAGAC
ATGATGCCCATGTCTTGAATTTTCCCCGGCTGGGTCTCCTGGCCTCAGCCGGGAACCGGG
GCCCAGTTAGACTATTTTCCACAAGGATGATGGTTTCAGCAGGGATGACATCATCATCAT
CACATTCAGGGCTATTTTTTCCCCATAAACCCAAGGGCAGGACTACCCTTAGCTAACTCT
CTCCCAGTGACTGCAATAGAACCCTCTGGAAGCTCAGGAAGGGGTGGGCTGGGTCATAAG
CCGCCATATATTGTGTAGGCAGGTATGGCTTCTCTCCATCTCCCCGGATGTGTGAGGGGA
GAGGGGGAGGAGGAGGCGGCTTAGGTAAGCCCCCCCCCGCCCCATGCACCCTCCAGACAG
GCAGGCACAGGTTAGAAGTATGACGCCCTCGTTCCCCAGCCTTTTCTCAAGGCAGCAGCA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGGTGACATGTAGCGGAGGGCCCAGGATAGTTTATTCTTCTAGGGCCAGCAGAAAAAGAC
ATGATGCCCATGTCTTGAATTTTCCCCGGCTGGGTCTCCTGGCCTCAGCCGGGAACCGGG
GCCCAGTTAGACTATTTTCCACAAGGATGATGGTTTCAGCAGGGATGACATCATCATCAT
CACATTCAGGGCTATTTTTTCCCCATAAACCCAAGGGCAGGACTACCCTTAGCTAACTCT
CTCCCAGTGACTGCAATAGAACCCTCTGGAAGCTCAGGAAGGGGTGGGCTGGGTCATAAG
CCGCCATATATTGTGTAGGCAGGTATGGCTTCTCTCCATCTCCCCGGATGTGTGAGGGGA
GAGGGGGAGGAGGAGGCGGCTTAGGTAAGCCCCCCCCCGCCCCATGCACCCTCCAGACAG
GCAGGCACAGGTTAGAAGTATGACGCCCTCGTTCCCCAGCCTTTTCTCAAGGCAGCAGCA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
364-476, - strand, RNAmicro p=0.99945 |
|
341-396, + strand, RNAmicro p=0.997963 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
364-476, - strand, RNAmicro p=0.99945 |
|
341-396, + strand, RNAmicro p=0.997963 |
|
108-461, gnl|bosTau2|chr13 (46897598-46897959) |
|
108-461, gnl|canFam2|chr24 (25093353-25093969) |
|
108-461, gnl|echTel1|scaffold_245915 (3611-3104) |
|
108-461, gnl|hg17|chr20 (30859638-30860224) |
|
108-461, gnl|Hg17|chr20 (30859959-30860371) |
|
108-461, gnl|loxAfr1|scaffold_31779 (2974-2415) |
|
108-461, gnl|mm7|chr2 (153427521-153428039) |
|
108-461, gnl|monDom2|scaffold_38 (148039-147356) |
|
108-461, gnl|oryCun1|scaffold_177150 (10455-10999) |
|
108-461, gnl|panTro1|chr21 (32580463-32581049) |
|
108-461, gnl|rheMac2|chr10 (31747247-31746658) |
|
108-461, gnl|rn3|chr3 (143973851-143974336) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
108-461, gnl|bosTau2|chr13 (46897598-46897959) |
|
108-461, gnl|canFam2|chr24 (25093353-25093969) |
|
108-461, gnl|echTel1|scaffold_245915 (3611-3104) |
|
108-461, gnl|hg17|chr20 (30859638-30860224) |
|
108-461, gnl|Hg17|chr20 (30859959-30860371) |
|
108-461, gnl|loxAfr1|scaffold_31779 (2974-2415) |
|
108-461, gnl|mm7|chr2 (153427521-153428039) |
|
108-461, gnl|monDom2|scaffold_38 (148039-147356) |
|
108-461, gnl|oryCun1|scaffold_177150 (10455-10999) |
|
108-461, gnl|panTro1|chr21 (32580463-32581049) |
|
108-461, gnl|rheMac2|chr10 (31747247-31746658) |
|
108-461, gnl|rn3|chr3 (143973851-143974336) |
|
ste (0.135208) |
|
pla (0.133672) |
|
med (0.116252) |
|
ste (0.135208) |
|
pla (0.133672) |
|
med (0.116252) |
