Ss1.1-rste26_b13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAGAACTAGTGTCAGAAGCTTATCAAATCCTAGACCAGAAATTTAAGTTGATTCAGCCC CATGTTCAAGCAAGCAACAATTGCTGGGAAGAGGCCATTTCTCAAGTGGACAAATTGCTA CGAAGAAATACAGATAAAAAAGGCAAAGCGGAAATGGCATGTGAAAACCCACGCTGTACT ATGGTACCCTTGATGCAGCCCACTCTACATATTGCAGACAAAGATCCAATCCCTGAGGAG CAGGAGTTAGAAGCTTATGTAGATGATATAGATATGGACAGTGATTTCGGAAAGGATGAT TTTTATTACTTGTCTCAAGAAGACAGAGAGAGACAGAAGCGTGAGCATGAAGAATCCAAG AGGGTACTCCAAGAACTAAAATCTGTGCTGGGATTTAAAGCATCAGAGGCAGAAAGGCAG AAGTGGAAGCAACTTCTATTTAGTGATCATGCTGTGTTGAAATCCTTCTCTCCTGTAGAC CCAGTGGAACCCATAAGTAATTCAGAATCATCAGTGGATTCAGATATGGGGAAAGTTGGT AAAAATGATACTGAAGAGGAAAGTAGTAAACCCTCCACCACTGACAATGAAATAAGTAGT AGGACTGAGTATTTATGTGAAAACCCTCTAGATGGTCAAAATAAAGACAATTCTGCAAAT GAAGTCTTCTTCCAAGGAGCTGAAGAAAGAGTGTGTTACCAGTGTGAGAGTGAAGATGAG TCCCAGCAGGCAGATGTAGGTGGCCTGGCCCCTTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAGAACTAGTGTCAGAAGCTTATCAAATCCTAGACCAGAAATTTAAGTTGATTCAGCCC CATGTTCAAGCAAGCAACAATTGCTGGGAAGAGGCCATTTCTCAAGTGGACAAATTGCTA CGAAGAAATACAGATAAAAAAGGCAAAGCGGAAATGGCATGTGAAAACCCACGCTGTACT ATGGTACCCTTGATGCAGCCCACTCTACATATTGCAGACAAAGATCCAATCCCTGAGGAG CAGGAGTTAGAAGCTTATGTAGATGATATAGATATGGACAGTGATTTCGGAAAGGATGAT TTTTATTACTTGTCTCAAGAAGACAGAGAGAGACAGAAGCGTGAGCATGAAGAATCCAAG AGGGTACTCCAAGAACTAAAATCTGTGCTGGGATTTAAAGCATCAGAGGCAGAAAGGCAG AAGTGGAAGCAACTTCTATTTAGTGATCATGCTGTGTTGAAATCCTTCTCTCCTGTAGAC CCAGTGGAACCCATAAGTAATTCAGAATCATCAGTGGATTCAGATATGGGGAAAGTTGGT AAAAATGATACTGAAGAGGAAAGTAGTAAACCCTCCACCACTGACAATGAAATAAGTAGT AGGACTGAGTATTTATGTGAAAACCCTCTAGATGGTCAAAATAAAGACAATTCTGCAAAT GAAGTCTTCTTCCAAGGAGCTGAAGAAAGAGTGTGTTACCAGTGTGAGAGTGAAGATGAG TCCCAGCAGGCAGATGTAGGTGGCCTGGCCCCTTCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 1-143, gnl|bosTau2|chr5 (17305261-17305119) | |
| 1-143, gnl|canFam2|chr15 (38228194-38228335) | |
| 1-143, gnl|canFam2|chr15 (38228352-38228264) | |
| 1-143, gnl|danRer3|chr4 (21707790-21707868) | |
| 1-143, gnl|dasNov1|scaffold_289456 (435-576) | |
| 1-143, gnl|dasNov1|scaffold_289456 (593-505) | |
| 1-143, gnl|fr1|chrUn (228652918-228652777) | |
| 1-143, gnl|fr1|chrUn (228652748-228652848) | |
| 1-143, gnl|galGal2|chr1 (42296467-42296608) | |
| 1-143, gnl|galGal2|chr1 (42296625-42296537) | |
| 1-143, gnl|hg17|chr12 (94183945-94184086) | |
| 1-143, gnl|Hg17|chr12 (94183960-94184102) | |
| 1-143, gnl|hg17|chrX (46071157-46071247) | |
| 1-143, gnl|loxAfr1|scaffold_154251 (4299-4440) | |
| 1-143, gnl|loxAfr1|scaffold_154251 (4452-4369) | |
| 1-143, gnl|mm7|chr10 (93539377-93539236) | |
| 1-143, gnl|mm7|chr10 (93539219-93539307) | |
| 1-143, gnl|Mm7|chr10 (93539360-93539218) | |
| 1-143, gnl|monDom2|scaffold_34 (20720442-20720301) | |
| 1-143, gnl|monDom2|scaffold_34 (20720284-20720372) | |
| 1-143, gnl|oryCun1|scaffold_141122 (1053-914) | |
| 1-143, gnl|oryCun1|scaffold_141122 (897-985) | |
| 1-143, gnl|panTro1|chr10 (96487431-96487572) | |
| 1-143, gnl|panTro1|chr10 (96487589-96487501) | |
| 1-143, gnl|rheMac2|chr11 (96517314-96517455) | |
| 1-143, gnl|rheMac2|chrX (44293150-44293240) | |
| 1-143, gnl|rn3|chr7 (31127482-31127341) | |
| 1-143, gnl|rn3|chr7 (31127324-31127412) | |
| 1-143, gnl|tetNig1|chr19 (1141967-1141826) | |
| 1-143, gnl|tetNig1|chr19 (1141826-1141897) | |
| 1-143, gnl|xenTro1|scaffold_109 (2262160-2262016) | |
| 1-143, gnl|xenTro1|scaffold_109 (2262003-2262090) | |
| 451-756, gnl|bosTau2|chr5 (17293484-17293179) | |
| 451-756, gnl|Hg17|chr12 (94196408-94196707) | |
| 451-756, gnl|Mm7|chr10 (93529610-93529308) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-143, gnl|bosTau2|chr5 (17305261-17305119) | |
| 1-143, gnl|canFam2|chr15 (38228194-38228335) | |
| 1-143, gnl|canFam2|chr15 (38228352-38228264) | |
| 1-143, gnl|danRer3|chr4 (21707790-21707868) | |
| 1-143, gnl|dasNov1|scaffold_289456 (435-576) | |
| 1-143, gnl|dasNov1|scaffold_289456 (593-505) | |
| 1-143, gnl|fr1|chrUn (228652918-228652777) | |
| 1-143, gnl|fr1|chrUn (228652748-228652848) | |
| 1-143, gnl|galGal2|chr1 (42296467-42296608) | |
| 1-143, gnl|galGal2|chr1 (42296625-42296537) | |
| 1-143, gnl|hg17|chr12 (94183945-94184086) | |
| 1-143, gnl|Hg17|chr12 (94183960-94184102) | |
| 1-143, gnl|hg17|chrX (46071157-46071247) | |
| 1-143, gnl|loxAfr1|scaffold_154251 (4299-4440) | |
| 1-143, gnl|loxAfr1|scaffold_154251 (4452-4369) | |
| 1-143, gnl|mm7|chr10 (93539377-93539236) | |
| 1-143, gnl|mm7|chr10 (93539219-93539307) | |
| 1-143, gnl|Mm7|chr10 (93539360-93539218) | |
| 1-143, gnl|monDom2|scaffold_34 (20720442-20720301) | |
| 1-143, gnl|monDom2|scaffold_34 (20720284-20720372) | |
| 1-143, gnl|oryCun1|scaffold_141122 (1053-914) | |
| 1-143, gnl|oryCun1|scaffold_141122 (897-985) | |
| 1-143, gnl|panTro1|chr10 (96487431-96487572) | |
| 1-143, gnl|panTro1|chr10 (96487589-96487501) | |
| 1-143, gnl|rheMac2|chr11 (96517314-96517455) | |
| 1-143, gnl|rheMac2|chrX (44293150-44293240) | |
| 1-143, gnl|rn3|chr7 (31127482-31127341) | |
| 1-143, gnl|rn3|chr7 (31127324-31127412) | |
| 1-143, gnl|tetNig1|chr19 (1141967-1141826) | |
| 1-143, gnl|tetNig1|chr19 (1141826-1141897) | |
| 1-143, gnl|xenTro1|scaffold_109 (2262160-2262016) | |
| 1-143, gnl|xenTro1|scaffold_109 (2262003-2262090) | |
| 451-756, gnl|bosTau2|chr5 (17293484-17293179) | |
| 451-756, gnl|Hg17|chr12 (94196408-94196707) | |
| 451-756, gnl|Mm7|chr10 (93529610-93529308) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fat (0.147427) | |
| ste (0.135208) | |
| bla (0.124347) |