Ss1.1-rste27_p1.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCAGATGGACCCCAGACATCTCAAGGGAAGGGGACTGGCTTATTGGCAGAAAGAGGAAGA GAATCGTAAATTACACTCCAGATATGGCACGAGTTGATGTGGACGAGGCTATCCAAAAAG GCATAGAAGTGTGGAGCAATGTGACTCCACTGACATTCACCAAGATTTCCAAGGGCATTG CAGACATCATGATTGCCTTTAGGACCCGAGTCCACGGTCGGTGTCCTCGTTATTTTGATG GCCCCTTGGGAGTCCTCGGCCACGCCTTTCCTCCTGGTCTGGGTCTGGGTGGAGACACTC ATTTTGATGAAGATGAAAACTGGACCAAGGATGGAACAGGACTCAGCTTGTTTCTTGTGG CTGCTCATGAATTTGGTCATTCACTGGGGCTCTCTCACTCCAATGATCCAACAGCTCTGA TGTTCCCAAATTATGTCTCCATGGATCCTAGCAAATACCCACTTTCTCAGGACGATGTCA ATGGAATCCAGTCCATCTATGGACGTCAACCTACAGGACCCGCTAAGTCAAAGGAACCCA CTGTACCCCATGCCTGTGACCCTGACTTGACTTTTGATGCTATCACCACTTTCCGCAGAG AAGTAATGTTCTTTAAAGGCAGGCACCTGTGGAGGATCTATTATGATATCACCAATATTG AATTTGAACTAATCTCTACATTCTGGCCATCTCTGCCAGCTGATATTCAAGCAGCATATG AGAACCCAAAAGATAAGATTCTGGTATTTAAAGATGATAACTTCTGGATGATCAGAGGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCAGATGGACCCCAGACATCTCAAGGGAAGGGGACTGGCTTATTGGCAGAAAGAGGAAGA GAATCGTAAATTACACTCCAGATATGGCACGAGTTGATGTGGACGAGGCTATCCAAAAAG GCATAGAAGTGTGGAGCAATGTGACTCCACTGACATTCACCAAGATTTCCAAGGGCATTG CAGACATCATGATTGCCTTTAGGACCCGAGTCCACGGTCGGTGTCCTCGTTATTTTGATG GCCCCTTGGGAGTCCTCGGCCACGCCTTTCCTCCTGGTCTGGGTCTGGGTGGAGACACTC ATTTTGATGAAGATGAAAACTGGACCAAGGATGGAACAGGACTCAGCTTGTTTCTTGTGG CTGCTCATGAATTTGGTCATTCACTGGGGCTCTCTCACTCCAATGATCCAACAGCTCTGA TGTTCCCAAATTATGTCTCCATGGATCCTAGCAAATACCCACTTTCTCAGGACGATGTCA ATGGAATCCAGTCCATCTATGGACGTCAACCTACAGGACCCGCTAAGTCAAAGGAACCCA CTGTACCCCATGCCTGTGACCCTGACTTGACTTTTGATGCTATCACCACTTTCCGCAGAG AAGTAATGTTCTTTAAAGGCAGGCACCTGTGGAGGATCTATTATGATATCACCAATATTG AATTTGAACTAATCTCTACATTCTGGCCATCTCTGCCAGCTGATATTCAAGCAGCATATG AGAACCCAAAAGATAAGATTCTGGTATTTAAAGATGATAACTTCTGGATGATCAGAGGAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 60-210, gnl|bosTau2|chr15 (1195140-1195290) | |
| 60-210, gnl|canFam2|chr5 (32062335-32062161) | |
| 60-210, gnl|danRer3|chr15 (33058687-33058502) | |
| 60-210, gnl|dasNov1|scaffold_35851 (4968-5137) | |
| 60-210, gnl|echTel1|scaffold_304402 (21889-21714) | |
| 60-210, gnl|fr1|chrUn (274465789-274465997) | |
| 60-210, gnl|galGal2|chr1 (174416494-174416311) | |
| 60-210, gnl|hg17|chr11 (102078845-102079014) | |
| 60-210, gnl|Hg17|chr11 (102079061-102078911) | |
| 60-210, gnl|loxAfr1|scaffold_2596 (61887-61709) | |
| 60-210, gnl|mm7|chr9 (7571624-7571462) | |
| 60-210, gnl|Mm7|chr9 (7571413-7571563) | |
| 60-210, gnl|monDom2|scaffold_65 (7976388-7976566) | |
| 60-210, gnl|oryCun1|scaffold_179522 (48438-48654) | |
| 60-210, gnl|panTro1|chr9 (104059397-104059566) | |
| 60-210, gnl|rheMac2|chr14 (101305594-101305763) | |
| 60-210, gnl|rn3|chr8 (4426192-4426023) | |
| 60-210, gnl|tetNig1|chrUn_random (50663236-50663025) | |
| 60-210, gnl|xenTro1|scaffold_601 (554845-554658) | |
| 338-502, gnl|bosTau2|chr15 (1200687-1200851) | |
| 338-502, gnl|canFam2|chr5 (32067988-32067851) | |
| 338-502, gnl|danRer3|chr15 (33059494-33059374) | |
| 338-502, gnl|dasNov1|scaffold_35851 (783-920) | |
| 338-502, gnl|echTel1|scaffold_86194 (3066-3212) | |
| 338-502, gnl|fr1|chrUn (274465376-274465502) | |
| 338-502, gnl|galGal2|chr1 (174418892-174418756) | |
| 338-502, gnl|hg17|chr11 (102072588-102072725) | |
| 338-502, gnl|Hg17|chr11 (102072778-102072614) | |
| 338-502, gnl|loxAfr1|scaffold_2596 (66850-66713) | |
| 338-502, gnl|mm7|chr9 (7575613-7575476) | |
| 338-502, gnl|Mm7|chr9 (7575421-7575585) | |
| 338-502, gnl|monDom2|scaffold_65 (7971638-7971772) | |
| 338-502, gnl|oryCun1|scaffold_172589 (17230-17367) | |
| 338-502, gnl|panTro1|chr9 (104053127-104053264) | |
| 338-502, gnl|rheMac2|chr14 (101299096-101299233) | |
| 338-502, gnl|rn3|chr8 (4429103-4428966) | |
| 338-502, gnl|tetNig1|chrUn_random (50663626-50663500) | |
| 338-502, gnl|xenTro1|scaffold_601 (555350-555217) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 60-210, gnl|bosTau2|chr15 (1195140-1195290) | |
| 60-210, gnl|canFam2|chr5 (32062335-32062161) | |
| 60-210, gnl|danRer3|chr15 (33058687-33058502) | |
| 60-210, gnl|dasNov1|scaffold_35851 (4968-5137) | |
| 60-210, gnl|echTel1|scaffold_304402 (21889-21714) | |
| 60-210, gnl|fr1|chrUn (274465789-274465997) | |
| 60-210, gnl|galGal2|chr1 (174416494-174416311) | |
| 60-210, gnl|hg17|chr11 (102078845-102079014) | |
| 60-210, gnl|Hg17|chr11 (102079061-102078911) | |
| 60-210, gnl|loxAfr1|scaffold_2596 (61887-61709) | |
| 60-210, gnl|mm7|chr9 (7571624-7571462) | |
| 60-210, gnl|Mm7|chr9 (7571413-7571563) | |
| 60-210, gnl|monDom2|scaffold_65 (7976388-7976566) | |
| 60-210, gnl|oryCun1|scaffold_179522 (48438-48654) | |
| 60-210, gnl|panTro1|chr9 (104059397-104059566) | |
| 60-210, gnl|rheMac2|chr14 (101305594-101305763) | |
| 60-210, gnl|rn3|chr8 (4426192-4426023) | |
| 60-210, gnl|tetNig1|chrUn_random (50663236-50663025) | |
| 60-210, gnl|xenTro1|scaffold_601 (554845-554658) | |
| 338-502, gnl|bosTau2|chr15 (1200687-1200851) | |
| 338-502, gnl|canFam2|chr5 (32067988-32067851) | |
| 338-502, gnl|danRer3|chr15 (33059494-33059374) | |
| 338-502, gnl|dasNov1|scaffold_35851 (783-920) | |
| 338-502, gnl|echTel1|scaffold_86194 (3066-3212) | |
| 338-502, gnl|fr1|chrUn (274465376-274465502) | |
| 338-502, gnl|galGal2|chr1 (174418892-174418756) | |
| 338-502, gnl|hg17|chr11 (102072588-102072725) | |
| 338-502, gnl|Hg17|chr11 (102072778-102072614) | |
| 338-502, gnl|loxAfr1|scaffold_2596 (66850-66713) | |
| 338-502, gnl|mm7|chr9 (7575613-7575476) | |
| 338-502, gnl|Mm7|chr9 (7575421-7575585) | |
| 338-502, gnl|monDom2|scaffold_65 (7971638-7971772) | |
| 338-502, gnl|oryCun1|scaffold_172589 (17230-17367) | |
| 338-502, gnl|panTro1|chr9 (104053127-104053264) | |
| 338-502, gnl|rheMac2|chr14 (101299096-101299233) | |
| 338-502, gnl|rn3|chr8 (4429103-4428966) | |
| 338-502, gnl|tetNig1|chrUn_random (50663626-50663500) | |
| 338-502, gnl|xenTro1|scaffold_601 (555350-555217) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cut (0.169924) | |
| ste (0.135208) |