Non-Coding RNA Search

Ss1.1-rste28_e1.5.5

Sequence:


               
               GAGAGAACTAGTTTTTTTTTTTTTTTTTTTTTTTTTCACCAAGTACTTTTATGACAGATA
CTGTACTGAGCATTTGACAAGTACCATCTCTCTTAATACTAAGAATCGCCACTCTAGAAG
GTTAAGTGTTACTACTATCTCCATGTTACAGGAAGAAACTAAGGCTTATAGAGGTTGAGT
AATTTATGCAGGGTCCCACAGCTAATTAGAGGTGTGCCTGCAATTCAAAGCCTGATGTGC
ATGCTCAGAGTATTTTACTCAACCACCACACTACACTCTCTCTCAAATGGGCTAGCCATT
TGAGAGTAATTAGTTACCTGACATCAAGTTCTACCTTATTGCAGTATCACTTAGGAAAGA
CCACTTGAAAGGACTGAAGGTCCAGGACTAAGGTTCCCCAGGACTAAGCATCAAGTGGAT
GTTGCAGTCACATTTTTATCCATTTCACATTCAAGACCAAGCTCCCAAGCACCTCTTCTA
CAGCTGCCTCACTATACATACCCATTCTTAGTCCATCCCAAAATGAATTCTGACAAAGAC
ACATTAACTGTACATAGTCAGCTGGCCTACCAGGTCCTTTATGCAGTTTCATATACAAGG
TGACACCAAGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGAGAACTAGTTTTTTTTTTTTTTTTTTTTTTTTTCACCAAGTACTTTTATGACAGATA
CTGTACTGAGCATTTGACAAGTACCATCTCTCTTAATACTAAGAATCGCCACTCTAGAAG
GTTAAGTGTTACTACTATCTCCATGTTACAGGAAGAAACTAAGGCTTATAGAGGTTGAGT
AATTTATGCAGGGTCCCACAGCTAATTAGAGGTGTGCCTGCAATTCAAAGCCTGATGTGC
ATGCTCAGAGTATTTTACTCAACCACCACACTACACTCTCTCTCAAATGGGCTAGCCATT
TGAGAGTAATTAGTTACCTGACATCAAGTTCTACCTTATTGCAGTATCACTTAGGAAAGA
CCACTTGAAAGGACTGAAGGTCCAGGACTAAGGTTCCCCAGGACTAAGCATCAAGTGGAT
GTTGCAGTCACATTTTTATCCATTTCACATTCAAGACCAAGCTCCCAAGCACCTCTTCTA
CAGCTGCCTCACTATACATACCCATTCTTAGTCCATCCCAAAATGAATTCTGACAAAGAC
ACATTAACTGTACATAGTCAGCTGGCCTACCAGGTCCTTTATGCAGTTTCATATACAAGG
TGACACCAAGTT

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               419-612, gnl|bosTau2|chr14 (36094732-36094929)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               419-612, gnl|bosTau2|chr14 (36094732-36094929)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fhi (0.169578)
               

               
               hyp (0.142837)
               

               
               ste (0.135208)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)
               

               
               hyp (0.142837)
               

               
               ste (0.135208)