Non-Coding RNA Search

Ss1.1-rste29_h24.5

Sequence:


               
               TTTCTAAAACTCATAAGGAAGCTTTTGAGCAGGTCTCAAACTTAAGATGTCTTTTTAAGA
AAAGGAGAAAAAAGTTGTTATTGTCTGTGCAGAAGTAAATTGTAGGTGACTGAGAGTCTC
AGTCAGGCCCTTTTAATGCTGGTCATGCAAGGATATTGGAAATAGTGACAAACTGCGGTG
TCAAGTGTACTGCTGGGCAGAGAGGTGATGATTACCGTGAGTAGCCACCCACCATAGGGG
ATGATGTTTTCTTCTTTTTGAGAATTTGCATTATCAGTACCCTCCCCTCACACATAGAAG
AAAGTTCATTAATGCTGTGTCAGATCCTGCTACTGCCATCACACATCAGCCTCTGAGGTG
ATGGTCTTCCTTGCTCCTGGAAACCCTAGAACCCACCCCCCACCCCTGCGCAGTTGATGT
TTGGACCCCAAGACAGGTAAACCTCTTTTGTAATTTTAATAGACGGGAGAAACCATCCCA
GTCCTATTGTTCCAGGCAGTTATGTATCATTCTTGTTCAGTGTCCAAAATGGAGTTCAAA
GTCCTCTCACCAAATCTGTGATTAACTTGTTTAATTGGAGCGCCCATCCCTTAGTCCTAC
CTAAAGTCAGCCTTATTACTGACACCGTTCAGACTGCCTTGTCCGGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCTAAAACTCATAAGGAAGCTTTTGAGCAGGTCTCAAACTTAAGATGTCTTTTTAAGA
AAAGGAGAAAAAAGTTGTTATTGTCTGTGCAGAAGTAAATTGTAGGTGACTGAGAGTCTC
AGTCAGGCCCTTTTAATGCTGGTCATGCAAGGATATTGGAAATAGTGACAAACTGCGGTG
TCAAGTGTACTGCTGGGCAGAGAGGTGATGATTACCGTGAGTAGCCACCCACCATAGGGG
ATGATGTTTTCTTCTTTTTGAGAATTTGCATTATCAGTACCCTCCCCTCACACATAGAAG
AAAGTTCATTAATGCTGTGTCAGATCCTGCTACTGCCATCACACATCAGCCTCTGAGGTG
ATGGTCTTCCTTGCTCCTGGAAACCCTAGAACCCACCCCCCACCCCTGCGCAGTTGATGT
TTGGACCCCAAGACAGGTAAACCTCTTTTGTAATTTTAATAGACGGGAGAAACCATCCCA
GTCCTATTGTTCCAGGCAGTTATGTATCATTCTTGTTCAGTGTCCAAAATGGAGTTCAAA
GTCCTCTCACCAAATCTGTGATTAACTTGTTTAATTGGAGCGCCCATCCCTTAGTCCTAC
CTAAAGTCAGCCTTATTACTGACACCGTTCAGACTGCCTTGTCCGGGA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-648, gnl|bosTau2|chr1 (47332380-47331761)
               

               
               1-648, gnl|Hg17|chr3 (191081030-191081667)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-648, gnl|bosTau2|chr1 (47332380-47331761)
               

               
               1-648, gnl|Hg17|chr3 (191081030-191081667)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.405625)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.405625)

	1-648, gnl\|bosTau2\|chr1 (47332380-47331761)
	1-648, gnl\|Hg17\|chr3 (191081030-191081667)