Ss1.1-rste30_i9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGCACCAGCACTTCCAGGAACCCGAGGTCGGCTGCTGCGGGAAATACTTCCTGTTTGGC TTCAACATCGTCTTCTGGGTGCTGGGAGCCCTGTTCCTGGCCATTGGCCTCTGGGCCTGG GGTGAGAAGGGCGTTCTCTCTAACATCTCGGCGCTGACAGATCTGGGAGGCCTTGACCCT GTGTGGCTGTTTGTAGTGGTTGGAGGCATCATGTCGGTGCTGGGCTTTGCCGGCTGCATC GGGGCCCTCCGGGAGAACACCTTCCTGCTCAAGTTTTTCTCTGTGTTCCTTGGCCTCATC TTCTTCCTGGAGCTGGCAACAGGGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGAC CAGCTCAACCTCTTCATCAACAACAACGTCAAGGCCTATCGGGACGACATTGACCTCCAG AACCTCATTGACTTTGCTCAGGAATACTGGTCTTGCTGCGGAGCCCGAGGGCCCAACGAC TGGAACCTCAATATCTACTTCAACTGCACTGACTTGAACCCAAGCCGGGAGCGCTGTGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGCACCAGCACTTCCAGGAACCCGAGGTCGGCTGCTGCGGGAAATACTTCCTGTTTGGC TTCAACATCGTCTTCTGGGTGCTGGGAGCCCTGTTCCTGGCCATTGGCCTCTGGGCCTGG GGTGAGAAGGGCGTTCTCTCTAACATCTCGGCGCTGACAGATCTGGGAGGCCTTGACCCT GTGTGGCTGTTTGTAGTGGTTGGAGGCATCATGTCGGTGCTGGGCTTTGCCGGCTGCATC GGGGCCCTCCGGGAGAACACCTTCCTGCTCAAGTTTTTCTCTGTGTTCCTTGGCCTCATC TTCTTCCTGGAGCTGGCAACAGGGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGAC CAGCTCAACCTCTTCATCAACAACAACGTCAAGGCCTATCGGGACGACATTGACCTCCAG AACCTCATTGACTTTGCTCAGGAATACTGGTCTTGCTGCGGAGCCCGAGGGCCCAACGAC TGGAACCTCAATATCTACTTCAACTGCACTGACTTGAACCCAAGCCGGGAGCGCTGTGGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 80-276, gnl|bosTau2|chr7 (26280653-26280848) | |
| 80-276, gnl|canFam2|chr4 (39881362-39881203) | |
| 80-276, gnl|danRer3|chr10 (2318920-2319072) | |
| 80-276, gnl|dasNov1|scaffold_32863 (41940-42084) | |
| 80-276, gnl|echTel1|scaffold_322871 (43013-42883) | |
| 80-276, gnl|fr1|chrUn (219372490-219372642) | |
| 80-276, gnl|galGal2|chr4 (60307762-60307607) | |
| 80-276, gnl|hg17|chr5 (176011359-176011518) | |
| 80-276, gnl|Hg17|chr5 (176011314-176011507) | |
| 80-276, gnl|loxAfr1|scaffold_6636 (4086-4245) | |
| 80-276, gnl|mm7|chr13 (53874571-53874742) | |
| 80-276, gnl|Mm7|chr13 (53874523-53874719) | |
| 80-276, gnl|monDom2|scaffold_6 (18479608-18479452) | |
| 80-276, gnl|oryCun1|scaffold_197373 (52741-52870) | |
| 80-276, gnl|panTro1|chr4 (183465975-183466134) | |
| 80-276, gnl|rheMac2|chr6 (173139881-173140040) | |
| 80-276, gnl|rn3|chr17 (15884385-15884226) | |
| 80-276, gnl|tetNig1|chr1 (2543783-2543935) | |
| 80-276, gnl|xenTro1|scaffold_235 (174807-174966) | |
| 277-447, gnl|bosTau2|chr7 (26281857-26282027) | |
| 277-447, gnl|Hg17|chr5 (176012350-176012520) | |
| 277-447, gnl|Mm7|chr13 (53875028-53875198) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 80-276, gnl|bosTau2|chr7 (26280653-26280848) | |
| 80-276, gnl|canFam2|chr4 (39881362-39881203) | |
| 80-276, gnl|danRer3|chr10 (2318920-2319072) | |
| 80-276, gnl|dasNov1|scaffold_32863 (41940-42084) | |
| 80-276, gnl|echTel1|scaffold_322871 (43013-42883) | |
| 80-276, gnl|fr1|chrUn (219372490-219372642) | |
| 80-276, gnl|galGal2|chr4 (60307762-60307607) | |
| 80-276, gnl|hg17|chr5 (176011359-176011518) | |
| 80-276, gnl|Hg17|chr5 (176011314-176011507) | |
| 80-276, gnl|loxAfr1|scaffold_6636 (4086-4245) | |
| 80-276, gnl|mm7|chr13 (53874571-53874742) | |
| 80-276, gnl|Mm7|chr13 (53874523-53874719) | |
| 80-276, gnl|monDom2|scaffold_6 (18479608-18479452) | |
| 80-276, gnl|oryCun1|scaffold_197373 (52741-52870) | |
| 80-276, gnl|panTro1|chr4 (183465975-183466134) | |
| 80-276, gnl|rheMac2|chr6 (173139881-173140040) | |
| 80-276, gnl|rn3|chr17 (15884385-15884226) | |
| 80-276, gnl|tetNig1|chr1 (2543783-2543935) | |
| 80-276, gnl|xenTro1|scaffold_235 (174807-174966) | |
| 277-447, gnl|bosTau2|chr7 (26281857-26282027) | |
| 277-447, gnl|Hg17|chr5 (176012350-176012520) | |
| 277-447, gnl|Mm7|chr13 (53875028-53875198) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nep (0.183925) | |
| cli (0.152812) | |
| ste (0.135208) | |
| pla (0.133672) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| cli (0.152812) | |
| ste (0.135208) | |
| pla (0.133672) |