Non-Coding RNA Search

Ss1.1-rsto207_i21.5

Sequence:


               
               TGGGTGATGGGCAGCCGCTGCTGCATGCGATCTGATCGGCTGGTGAGGGAAGGGGTCCTC
AGGGAGCCCCCCCTCTGCAGGCCAGAGTCCCCATCCTAGGAACAAGGTGGGTGAGCCAGG
AGCCCCTTCCCCCGCCGCCCCTTTCGCCTTGGTCCCTAGCTTTACCTTGTACATCAGAAG
ACTCTGCACACCCTTCAAGCCACTCTTTGCCTTTGGAGGAGCCAAAAGAGAATTAGACTT
GAGCATGATTTGGCCCCGGGATCTTGAGAACTCAGCCCTCCAACCCTGTGGACAGCTTTG
CTTCGTCTTGCTATCTGCTCACATGTGTCTCAACAATATATTCAAATTCCCCGTGGACCA
CCTACGAAGTCAATACACACTTTGCCCCTTTGACTAAGACAAAAGGAATATTCCTGGAGG
CAATAACCAGCCCTTCCAATGAAACAGAAACAGAGGAGTGGCAGAAAACAGAGCATCATA
AAAACGTGTCAGTGTTCAAAAGAGCAAAGGATAAAATCCAGTGGACAGTTCTGAGCTGTA
GAAGTTGGTCCTGGGAAACTTTGGGCTTGGGAGAAAGAAACACGAGGGCAAAAGCTGGGA
TTGTGGCGTCTCAGAAGGACAGAAGACATTTGCCAAAGAATTGTGCTTGTCAATTTTAAA
TAGAAAAGATGAGATCCGACAAAAATGAATGAAGGCGGTCAACAGAAAATAAAAATAGGA
AACATAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGTGATGGGCAGCCGCTGCTGCATGCGATCTGATCGGCTGGTGAGGGAAGGGGTCCTC
AGGGAGCCCCCCCTCTGCAGGCCAGAGTCCCCATCCTAGGAACAAGGTGGGTGAGCCAGG
AGCCCCTTCCCCCGCCGCCCCTTTCGCCTTGGTCCCTAGCTTTACCTTGTACATCAGAAG
ACTCTGCACACCCTTCAAGCCACTCTTTGCCTTTGGAGGAGCCAAAAGAGAATTAGACTT
GAGCATGATTTGGCCCCGGGATCTTGAGAACTCAGCCCTCCAACCCTGTGGACAGCTTTG
CTTCGTCTTGCTATCTGCTCACATGTGTCTCAACAATATATTCAAATTCCCCGTGGACCA
CCTACGAAGTCAATACACACTTTGCCCCTTTGACTAAGACAAAAGGAATATTCCTGGAGG
CAATAACCAGCCCTTCCAATGAAACAGAAACAGAGGAGTGGCAGAAAACAGAGCATCATA
AAAACGTGTCAGTGTTCAAAAGAGCAAAGGATAAAATCCAGTGGACAGTTCTGAGCTGTA
GAAGTTGGTCCTGGGAAACTTTGGGCTTGGGAGAAAGAAACACGAGGGCAAAAGCTGGGA
TTGTGGCGTCTCAGAAGGACAGAAGACATTTGCCAAAGAATTGTGCTTGTCAATTTTAAA
TAGAAAAGATGAGATCCGACAAAAATGAATGAAGGCGGTCAACAGAAAATAAAAATAGGA
AACATAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-725, gnl|bosTau2|chr7 (13913881-13913185)
               

               
               1-725, gnl|Hg17|chr19 (6419870-6421149)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-725, gnl|bosTau2|chr7 (13913881-13913185)
               

               
               1-725, gnl|Hg17|chr19 (6419870-6421149)

Expressed library(ies): 10 entry(ies)

More info

Expressed library(ies): 10 entry(ies)

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               sto (0.539471)
               

               
               lyg (0.399308)
               

               
               cmu (0.372787)
               

               
               cut (0.339847)
               

               
               csk (0.281492)
               

               
               ill (0.175593)
               

               
               sin (0.174948)
               

               
               pla (0.133672)
               

               
               pgl (0.118483)
               

               
               jej (0.0989218)

Expressed library(ies): 10 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.539471)
               

               
               lyg (0.399308)
               

               
               cmu (0.372787)
               

               
               cut (0.339847)
               

               
               csk (0.281492)
               

               
               ill (0.175593)
               

               
               sin (0.174948)
               

               
               pla (0.133672)
               

               
               pgl (0.118483)
               

               
               jej (0.0989218)

	1-725, gnl\|bosTau2\|chr7 (13913881-13913185)
	1-725, gnl\|Hg17\|chr19 (6419870-6421149)

	sto (0.539471)
	lyg (0.399308)
	cmu (0.372787)
	cut (0.339847)
	csk (0.281492)
	ill (0.175593)
	sin (0.174948)
	pla (0.133672)
	pgl (0.118483)
	jej (0.0989218)