Non-Coding RNA Search

Ss1.1-rsto210_b7.5

Sequence:


               
               CCCGGGTCGACCCACGCGTCCGCACGACTTCCAGCCCTGAAGCGAATCTGGCTCATGTTG
CCTTATAAAAGAGAAGCTTCGAATGAATGTTTAGCTTTTATCGGTTAAGTCCAATCTTGG
AATAAGTCATAGAGAATAACAAGACCGAGACTGATGTAGGAGAAGCTGTCGTCTTAAATT
GAGAGCAGGAGGAGGTGGAGGAGAAGGAAGGATGGAAACGTTGTCTTTAAAAAAAAACAA
AACAAACCCTCCTCACCAGGGGCGTTCGTTCCTTGTGCCCTGCTCGGGATGGGGTGGAGT
AAGAAGGTTAAAAAGAACGTATTCTTTGATGTGATCTTGGTCATTGTAGTAGCGTTTGTA
AACTATGGGGGGAAAGGGGTCATTTGCTTTCCTTTCATGGTGTTCATGTGTGCCTGAATG
GAGAGCCACTAAAACCTAAGGCTCTTCACCTGAGGTATTTGAATATGATGAGAGAATAAA
AGGTTGCCATTCTTTTTTTAATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCGGGTCGACCCACGCGTCCGCACGACTTCCAGCCCTGAAGCGAATCTGGCTCATGTTG
CCTTATAAAAGAGAAGCTTCGAATGAATGTTTAGCTTTTATCGGTTAAGTCCAATCTTGG
AATAAGTCATAGAGAATAACAAGACCGAGACTGATGTAGGAGAAGCTGTCGTCTTAAATT
GAGAGCAGGAGGAGGTGGAGGAGAAGGAAGGATGGAAACGTTGTCTTTAAAAAAAAACAA
AACAAACCCTCCTCACCAGGGGCGTTCGTTCCTTGTGCCCTGCTCGGGATGGGGTGGAGT
AAGAAGGTTAAAAAGAACGTATTCTTTGATGTGATCTTGGTCATTGTAGTAGCGTTTGTA
AACTATGGGGGGAAAGGGGTCATTTGCTTTCCTTTCATGGTGTTCATGTGTGCCTGAATG
GAGAGCCACTAAAACCTAAGGCTCTTCACCTGAGGTATTTGAATATGATGAGAGAATAAA
AGGTTGCCATTCTTTTTTTAATGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               27-504, gnl|bosTau2|chr2 (54520748-54520290)
               

               
               27-504, gnl|Hg17|chr2 (206467601-206468055)
               

               
               27-504, gnl|Mm7|chr1 (63037596-63038082)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               27-504, gnl|bosTau2|chr2 (54520748-54520290)
               

               
               27-504, gnl|Hg17|chr2 (206467601-206468055)
               

               
               27-504, gnl|Mm7|chr1 (63037596-63038082)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sto (0.179824)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.179824)

	27-504, gnl\|bosTau2\|chr2 (54520748-54520290)
	27-504, gnl\|Hg17\|chr2 (206467601-206468055)
	27-504, gnl\|Mm7\|chr1 (63037596-63038082)