Non-Coding RNA Search

Ss1.1-rsto213_a1.5

Sequence:


               
               ATGTCTCAGGTGCGGCCCTAAAAAGACAAAAAGAAAGGAAAAGGAAGCCCATAGTGGTTA
AGGGAATAATTCCTGCCCACCAAGAACCTGCTTTCGGCTTTCTGGTGGGGAGACAGACAT
AGCAAAGTTGTGTGAAAACAGGAAGGCAGTGTGGGTCAGAGAGGGCTTTGGGAGGTGGGA
GGGCTTCTTGGAGGAGGTGGCACCTGGGCCTTGAAGGAAGCCAAGAAAGCAGCCTAGGGG
AGCATGGGGGAGGGTGTTCATGGTAGGAGGACAAAAGCAAAGTCCTGGAAGTGAAGATGA
ATTTGGGGTGAGCTACACAGGCGGGAAAGAGGCCAGTGCGGTTGGAAGGGAGGGGCAAGG
GGAAAAGTGTTGGGATCTGAGTCAGAAAGTAACACTCACAGGCCAGAGAGTAATAACAGT
TCTGCAGGCTAGGTATGGAGCTACTAGCTCAAGGCATTCTTCCCACAGCCCAGCAGAGCA
GAGGTTGTTAAACTATTGCCTGCAGGCACATTCTGACCCGCTGCCTGTTTCTGTAAATAA
AGTTTTATTGGAGAACATTAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTCTCAGGTGCGGCCCTAAAAAGACAAAAAGAAAGGAAAAGGAAGCCCATAGTGGTTA
AGGGAATAATTCCTGCCCACCAAGAACCTGCTTTCGGCTTTCTGGTGGGGAGACAGACAT
AGCAAAGTTGTGTGAAAACAGGAAGGCAGTGTGGGTCAGAGAGGGCTTTGGGAGGTGGGA
GGGCTTCTTGGAGGAGGTGGCACCTGGGCCTTGAAGGAAGCCAAGAAAGCAGCCTAGGGG
AGCATGGGGGAGGGTGTTCATGGTAGGAGGACAAAAGCAAAGTCCTGGAAGTGAAGATGA
ATTTGGGGTGAGCTACACAGGCGGGAAAGAGGCCAGTGCGGTTGGAAGGGAGGGGCAAGG
GGAAAAGTGTTGGGATCTGAGTCAGAAAGTAACACTCACAGGCCAGAGAGTAATAACAGT
TCTGCAGGCTAGGTATGGAGCTACTAGCTCAAGGCATTCTTCCCACAGCCCAGCAGAGCA
GAGGTTGTTAAACTATTGCCTGCAGGCACATTCTGACCCGCTGCCTGTTTCTGTAAATAA
AGTTTTATTGGAGAACATTAAAAAAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               35-557, gnl|bosTau2|chr18 (45808158-45807648)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               35-557, gnl|bosTau2|chr18 (45808158-45807648)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               amn (0.417711)
               

               
               sto (0.179824)
               

               
               nca (0.136874)
               

               
               cly (0.120642)
               

               
               nbm (0.0993246)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               amn (0.417711)
               

               
               sto (0.179824)
               

               
               nca (0.136874)
               

               
               cly (0.120642)
               

               
               nbm (0.0993246)

	amn (0.417711)
	sto (0.179824)
	nca (0.136874)
	cly (0.120642)
	nbm (0.0993246)