Non-Coding RNA Search

Ss1.1-rsto219_a6.5

Sequence:


               
               GCCGAGGAACACGACCCCTTATTTACCAACATCTGAGGGTCACCGGGAGCGAGTTCTCAG
CCTCTCTCAAGCCTTGGCTGCTGAGGCGTCACAGTGGCACCGAATGATGACAGGTGGCAG
TTTGGACTCTCGAGGAGACCCTCTTCCCCCTGCGTCGCCACCTCCGTCAGATGCCACGCC
CTGCGTGTCCTCGCCCCCAAGATCTCCTCCAGTGGCCAGTTCCCACTCCACGGGGTTCTC
CCACCGAGGGACTGGGCGCGACGCAGGCCCGGCCTCTTGGGAGCCGACCTGGGATTCCGG
GACCGCCCCTCCCGCGCTAACCCCAGACGAGGAGGCGTGGCCTCTGAGAGTCACGCTGCT
ACAGTCCAGCTTCTGACCCGCCCAAGCAGGGCAGCCAATCAGAGCTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGAGGAACACGACCCCTTATTTACCAACATCTGAGGGTCACCGGGAGCGAGTTCTCAG
CCTCTCTCAAGCCTTGGCTGCTGAGGCGTCACAGTGGCACCGAATGATGACAGGTGGCAG
TTTGGACTCTCGAGGAGACCCTCTTCCCCCTGCGTCGCCACCTCCGTCAGATGCCACGCC
CTGCGTGTCCTCGCCCCCAAGATCTCCTCCAGTGGCCAGTTCCCACTCCACGGGGTTCTC
CCACCGAGGGACTGGGCGCGACGCAGGCCCGGCCTCTTGGGAGCCGACCTGGGATTCCGG
GACCGCCCCTCCCGCGCTAACCCCAGACGAGGAGGCGTGGCCTCTGAGAGTCACGCTGCT
ACAGTCCAGCTTCTGACCCGCCCAAGCAGGGCAGCCAATCAGAGCTGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               111-405, gnl|bosTau2|chr18 (48042792-48042498)
               

               
               111-405, gnl|Hg17|chr19 (54032623-54032329)
               

               
               111-405, gnl|Mm7|chr7 (41729499-41729796)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               111-405, gnl|bosTau2|chr18 (48042792-48042498)
               

               
               111-405, gnl|Hg17|chr19 (54032623-54032329)
               

               
               111-405, gnl|Mm7|chr7 (41729499-41729796)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sto (0.179824)
               

               
               hyp (0.142837)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.179824)
               

               
               hyp (0.142837)

	111-405, gnl\|bosTau2\|chr18 (48042792-48042498)
	111-405, gnl\|Hg17\|chr19 (54032623-54032329)
	111-405, gnl\|Mm7\|chr7 (41729499-41729796)