Ss1.1-rsto222_i1.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGCTCAGTCAGAATCCAATCTTCTTTGACTCGCTTCCTCAGGTTATGAGCAGGATAAAA GGGACAACTATTCCATTGAGAAGAAACCTCTTTCCCCTGATGCCTGAAAAACAGAAGAAA CCCAAGCTTATTTCATAGTTTAGATGTGTTAAAAATGTATATTAGTCT------------ ------------------------TATTATCCGTGAGGATGCAGGTTCAATCCCTGGCTT TGCTCAATGGGTTAAGGATCCAGTGTGGCCACGGGCTGTGGTATAGGCTGGCAGCTGCAG CTCTGATTCAACCCCTAGCCTGGGAACTTCCATGTGTTGCAGATGCAACCCTAAAAAGCA AAATAAAAAAGTATATTCGTCTGTAATTCCTATTATTTGTATAAGCTCCTATCTATAAAT GAGTCCAAAGCAATGACAGACTATTGGTAAAATTGCTAAGTACCTGAAAACAGTGAAGGA AAATATTATATTTATTTTTGGTTGTCACAGTCGAATACAATCAAGCTTCTAATTCAACTT ATTAAATATGTCAAATGTGATCAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGCTCAGTCAGAATCCAATCTTCTTTGACTCGCTTCCTCAGGTTATGAGCAGGATAAAA GGGACAACTATTCCATTGAGAAGAAACCTCTTTCCCCTGATGCCTGAAAAACAGAAGAAA CCCAAGCTTATTTCATAGTTTAGATGTGTTAAAAATGTATATTAGTCT------------ ------------------------TATTATCCGTGAGGATGCAGGTTCAATCCCTGGCTT TGCTCAATGGGTTAAGGATCCAGTGTGGCCACGGGCTGTGGTATAGGCTGGCAGCTGCAG CTCTGATTCAACCCCTAGCCTGGGAACTTCCATGTGTTGCAGATGCAACCCTAAAAAGCA AAATAAAAAAGTATATTCGTCTGTAATTCCTATTATTTGTATAAGCTCCTATCTATAAAT GAGTCCAAAGCAATGACAGACTATTGGTAAAATTGCTAAGTACCTGAAAACAGTGAAGGA AAATATTATATTTATTTTTGGTTGTCACAGTCGAATACAATCAAGCTTCTAATTCAACTT ATTAAATATGTCAAATGTGATCAAAAAAAAAAAAAA |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 52-168, gnl|bosTau2|chr15 (5079026-5079144) | |
| 52-168, gnl|canFam2|chr21 (9405981-9405696) | |
| 52-168, gnl|dasNov1|scaffold_24575 (36988-37283) | |
| 52-168, gnl|hg17|chr11 (93904669-93904977) | |
| 52-168, gnl|Hg17|chr11 (93904708-93904827) | |
| 52-168, gnl|loxAfr1|scaffold_26886 (8953-8638) | |
| 52-168, gnl|mm7|chr9 (14594208-14593937) | |
| 52-168, gnl|Mm7|chr9 (14594169-14594048) | |
| 52-168, gnl|monDom2|scaffold_15 (3171715-3171398) | |
| 52-168, gnl|panTro1|chr9 (95817041-95817348) | |
| 52-168, gnl|rheMac2|chr14 (93079041-93079352) | |
| 52-168, gnl|rn3|chr8 (11558383-11558116) | |
| 336-535, gnl|bosTau2|chr15 (5079134-5079339) | |
| 336-535, gnl|canFam2|chr21 (9405981-9405696) | |
| 336-535, gnl|dasNov1|scaffold_24575 (36988-37283) | |
| 336-535, gnl|hg17|chr11 (93904669-93904977) | |
| 336-535, gnl|Hg17|chr11 (93904818-93905018) | |
| 336-535, gnl|loxAfr1|scaffold_26886 (8953-8638) | |
| 336-535, gnl|mm7|chr9 (14594208-14593937) | |
| 336-535, gnl|monDom2|scaffold_15 (3171715-3171398) | |
| 336-535, gnl|panTro1|chr9 (95817041-95817348) | |
| 336-535, gnl|rheMac2|chr14 (93079041-93079352) | |
| 336-535, gnl|rn3|chr8 (11558383-11558116) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 52-168, gnl|bosTau2|chr15 (5079026-5079144) | |
| 52-168, gnl|canFam2|chr21 (9405981-9405696) | |
| 52-168, gnl|dasNov1|scaffold_24575 (36988-37283) | |
| 52-168, gnl|hg17|chr11 (93904669-93904977) | |
| 52-168, gnl|Hg17|chr11 (93904708-93904827) | |
| 52-168, gnl|loxAfr1|scaffold_26886 (8953-8638) | |
| 52-168, gnl|mm7|chr9 (14594208-14593937) | |
| 52-168, gnl|Mm7|chr9 (14594169-14594048) | |
| 52-168, gnl|monDom2|scaffold_15 (3171715-3171398) | |
| 52-168, gnl|panTro1|chr9 (95817041-95817348) | |
| 52-168, gnl|rheMac2|chr14 (93079041-93079352) | |
| 52-168, gnl|rn3|chr8 (11558383-11558116) | |
| 336-535, gnl|bosTau2|chr15 (5079134-5079339) | |
| 336-535, gnl|canFam2|chr21 (9405981-9405696) | |
| 336-535, gnl|dasNov1|scaffold_24575 (36988-37283) | |
| 336-535, gnl|hg17|chr11 (93904669-93904977) | |
| 336-535, gnl|Hg17|chr11 (93904818-93905018) | |
| 336-535, gnl|loxAfr1|scaffold_26886 (8953-8638) | |
| 336-535, gnl|mm7|chr9 (14594208-14593937) | |
| 336-535, gnl|monDom2|scaffold_15 (3171715-3171398) | |
| 336-535, gnl|panTro1|chr9 (95817041-95817348) | |
| 336-535, gnl|rheMac2|chr14 (93079041-93079352) | |
| 336-535, gnl|rn3|chr8 (11558383-11558116) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sto (0.179824) | |
| rec (0.17307) | |
| cst (0.140036) |