Non-Coding RNA Search

Ss1.1-rsto228_k21.5

Sequence:


               
               CTACAGAGCCCTCCATCACAAGGTCACTACGGCAGTTCTGGGTGACCAGCTGGGTGTTCT
ACAGCTCCAGCCAGTTCTGACACCATCTACCTGGAGTTAGCATCCGATCCCACAGTGTCT
CTTCAATGGGAGGAAGGTAAACATGGCGTTCAAGAACTCGGTGGAAAAAAGGGAAGCAAG
CAAGCAAGTCTGGTGTGGCCGATGCACAGAGAGCGAAGGGGAACAGGAACGAAAAACCAT
CAGAGACTATGATTTTGAAAAGACTTCACTCTAATTTGGGACTATGTCTGCCATTTGGAC
CCTCAGTTTACTTGTGGCGGCACGCACTGCGATGACTGCACCGTTTGTCCTGTAATTGCT
GTCTTCCAGTGAGCAGTTTGTTCCATTATGATCTCCTAGAACATTTTATCCTCAAAAAGA
TGTGGCACAGACTGAGTCTTCATTTTAAGGATGCTCCTTGAACTTCTCCAGATTTTAAAC
TATTGAACAAATGTGTTTTAAATAATAAAAAGTGGAGGAAAAAGAATGATCAGGATGGGG
ACATATTTTAAAATTCATATTGAATATTTCTTTTATTTTGGAAATGCAAATATATTATGG
GATGTAGCTTATAGATAACTCATTCATGATATGCATTAATAGTATAAATAAGTGGGTGGA
AATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTACAGAGCCCTCCATCACAAGGTCACTACGGCAGTTCTGGGTGACCAGCTGGGTGTTCT
ACAGCTCCAGCCAGTTCTGACACCATCTACCTGGAGTTAGCATCCGATCCCACAGTGTCT
CTTCAATGGGAGGAAGGTAAACATGGCGTTCAAGAACTCGGTGGAAAAAAGGGAAGCAAG
CAAGCAAGTCTGGTGTGGCCGATGCACAGAGAGCGAAGGGGAACAGGAACGAAAAACCAT
CAGAGACTATGATTTTGAAAAGACTTCACTCTAATTTGGGACTATGTCTGCCATTTGGAC
CCTCAGTTTACTTGTGGCGGCACGCACTGCGATGACTGCACCGTTTGTCCTGTAATTGCT
GTCTTCCAGTGAGCAGTTTGTTCCATTATGATCTCCTAGAACATTTTATCCTCAAAAAGA
TGTGGCACAGACTGAGTCTTCATTTTAAGGATGCTCCTTGAACTTCTCCAGATTTTAAAC
TATTGAACAAATGTGTTTTAAATAATAAAAAGTGGAGGAAAAAGAATGATCAGGATGGGG
ACATATTTTAAAATTCATATTGAATATTTCTTTTATTTTGGAAATGCAAATATATTATGG
GATGTAGCTTATAGATAACTCATTCATGATATGCATTAATAGTATAAATAAGTGGGTGGA
AATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               239-666, gnl|bosTau2|chr6 (52381289-52380861)
               

               
               239-666, gnl|Mm7|chr5 (97007694-97007279)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               239-666, gnl|bosTau2|chr6 (52381289-52380861)
               

               
               239-666, gnl|Mm7|chr5 (97007694-97007279)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               sto (0.179824)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               sto (0.179824)

	239-666, gnl\|bosTau2\|chr6 (52381289-52380861)
	239-666, gnl\|Mm7\|chr5 (97007694-97007279)