Non-Coding RNA Search

Ss1.1-rsug01_d9.5

Sequence:


               
               CCATTTTTTCCAATTTAAGGGATTAACCAGTGTTAACACTGTTAGTTGAACTTTTAGTTT
GAGGCCCATTAAACTGGTCTAAAGGTTTTAACGGTAGGTGCGATGGTCATCCAGTGGTTT
GATCCTTGCTGCAAAAGTAGGTTTTAATCAACCCTTGGAGTGAAGGATTTCCCTTTTCTC
TCTGAAATAGCCTCTTCCTACCTAAGCATTTGAGTTTGTGAACTCTCTTTATTCTCTTGC
ATTTCTGCTTGCAAACTGATGAGTTCTTTTCTGAGTTCATCTCTTTCCTGTGTATCTTGT
CAAATGCAATCATAAATATTTTGTTTTCTTGTCTTTTTTTTCCTTAGTAAAGGATAGATT
CTTTGTCCTCCAGATGCTCTCAAAGGACAGTTTCACCACTCCATAATATGCATTCCCCCA
GCATAAGTTATCTCTTTCATCCTCCAATATCAATTTTCTGAAGGCCTGCCAACTAAGCCA
ATGTTCAATATGCTAGGTTTTTTTGAAAACAGCCAATTCTTGTATCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCATTTTTTCCAATTTAAGGGATTAACCAGTGTTAACACTGTTAGTTGAACTTTTAGTTT
GAGGCCCATTAAACTGGTCTAAAGGTTTTAACGGTAGGTGCGATGGTCATCCAGTGGTTT
GATCCTTGCTGCAAAAGTAGGTTTTAATCAACCCTTGGAGTGAAGGATTTCCCTTTTCTC
TCTGAAATAGCCTCTTCCTACCTAAGCATTTGAGTTTGTGAACTCTCTTTATTCTCTTGC
ATTTCTGCTTGCAAACTGATGAGTTCTTTTCTGAGTTCATCTCTTTCCTGTGTATCTTGT
CAAATGCAATCATAAATATTTTGTTTTCTTGTCTTTTTTTTCCTTAGTAAAGGATAGATT
CTTTGTCCTCCAGATGCTCTCAAAGGACAGTTTCACCACTCCATAATATGCATTCCCCCA
GCATAAGTTATCTCTTTCATCCTCCAATATCAATTTTCTGAAGGCCTGCCAACTAAGCCA
ATGTTCAATATGCTAGGTTTTTTTGAAAACAGCCAATTCTTGTATCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-527, gnl|bosTau2|chr22 (8068514-8067978)
               

               
               1-527, gnl|Hg17|chr3 (37003434-37002541)
               

               
               1-527, gnl|Mm7|chr9 (110975442-110975937)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-527, gnl|bosTau2|chr22 (8068514-8067978)
               

               
               1-527, gnl|Hg17|chr3 (37003434-37002541)
               

               
               1-527, gnl|Mm7|chr9 (110975442-110975937)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tes (0.207814)
               

               
               sug (0.127291)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               sug (0.127291)

	1-527, gnl\|bosTau2\|chr22 (8068514-8067978)
	1-527, gnl\|Hg17\|chr3 (37003434-37002541)
	1-527, gnl\|Mm7\|chr9 (110975442-110975937)