Non-Coding RNA Search

Ss1.1-rsug01_i23.5

Sequence:


               
               CAGCATCCATGAGGACGTAGGTTTGATCCCTGGCCCTGCTCAGTGGGTTAAGGATCTGGC
GTTGCCGTGAGCTGTGGTGTAGGTCACAGATTCAGCTCAGATCCTGTGTTGCTGTGGCTG
TGGCATAGGCTAGCAACTACAGCTGTGATTTGACCCCTGGCCTGGGAACCTCCATAAGCT
GTGAGTGTGGCCCCCAAAAGACAAAAAATAATTAAATATAAATTTAATTTTTATTTAATA
CTAGAGTAGAGTTGATTTACAATGTTGTATTAGTTTCAGTGTACAGCAAAGTGATTCAGT
TATACATACATCATTATTTTTCAGATTCTTTTCCCACATAGGTTATTACAGAACATTAAG
TAAAGTTTGCTGTGCTATACAGTAGGTCCTTGTTGATTATCTGTTTTATATACAGTAATA
ATTATGGCCATTCTGACCTGTATGAAGTTGTACCTCACTGTAGTTTTGTTCTTTGTTTTT
TGGTTTTGTGTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTCTTTGTTTGGTTTTTTTTG
GCCATGCCCATAGCATTCAGAAGTTCCTGGGCCAGGGATCAAACTTGCACCAAAGCTGTA
ACCAAAGCCGCAGCAGCCACAATGCCAGATCCTTAACCCACTGAGCCACAAAGCAACTCC
AACTCATTGTAGTTTTGATTTGCATTTTTCAAATAATTTGTGATGATGAGCATCTTTTCA
TGTGTCTGTTGGCCTTCTCTGTATGTCTTCATACTCTGCCATGAGTATGGCAGATACACG
TGCCATCTGTATGACTTTCTTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCATCCATGAGGACGTAGGTTTGATCCCTGGCCCTGCTCAGTGGGTTAAGGATCTGGC
GTTGCCGTGAGCTGTGGTGTAGGTCACAGATTCAGCTCAGATCCTGTGTTGCTGTGGCTG
TGGCATAGGCTAGCAACTACAGCTGTGATTTGACCCCTGGCCTGGGAACCTCCATAAGCT
GTGAGTGTGGCCCCCAAAAGACAAAAAATAATTAAATATAAATTTAATTTTTATTTAATA
CTAGAGTAGAGTTGATTTACAATGTTGTATTAGTTTCAGTGTACAGCAAAGTGATTCAGT
TATACATACATCATTATTTTTCAGATTCTTTTCCCACATAGGTTATTACAGAACATTAAG
TAAAGTTTGCTGTGCTATACAGTAGGTCCTTGTTGATTATCTGTTTTATATACAGTAATA
ATTATGGCCATTCTGACCTGTATGAAGTTGTACCTCACTGTAGTTTTGTTCTTTGTTTTT
TGGTTTTGTGTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTCTTTGTTTGGTTTTTTTTG
GCCATGCCCATAGCATTCAGAAGTTCCTGGGCCAGGGATCAAACTTGCACCAAAGCTGTA
ACCAAAGCCGCAGCAGCCACAATGCCAGATCCTTAACCCACTGAGCCACAAAGCAACTCC
AACTCATTGTAGTTTTGATTTGCATTTTTCAAATAATTTGTGATGATGAGCATCTTTTCA
TGTGTCTGTTGGCCTTCTCTGTATGTCTTCATACTCTGCCATGAGTATGGCAGATACACG
TGCCATCTGTATGACTTTCTTTCT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               209-415, gnl|bosTau2|chr1 (20537434-20537226)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               209-415, gnl|bosTau2|chr1 (20537434-20537226)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

Help | Less info


               
               fat (0.294855)
               

               
               spl (0.286369)
               

               
               sin (0.174948)
               

               
               sug (0.127291)
               

               
               thg (0.126791)
               

               
               jej (0.0989218)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.294855)
               

               
               spl (0.286369)
               

               
               sin (0.174948)
               

               
               sug (0.127291)
               

               
               thg (0.126791)
               

               
               jej (0.0989218)

	fat (0.294855)
	spl (0.286369)
	sin (0.174948)
	sug (0.127291)
	thg (0.126791)
	jej (0.0989218)