Ss1.1-rsug02_a16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAATAAAGCAATTGAATTACAACTACAAGTGAAACAAAATGCAGAAGAGCTGCAAGACT TTATGAGGGATTTAGAAAACTGGGGCAAAAGATATTAAACAAAAGGATATGGAACTAAGA AGACAGAATGGTGTTCCTGACAGAGAATTTGCCTCCTATTCGGAATGGGAATTTTAGGAA AAAGAAGAAAGGCAAAGTTAAAGAGTCATCTACAAAAACCAAAGATGAAAACACGAAAAA CAGGATAAAATCTTATGATTATGAGGCATGGGCAAAACTTGATGTGGACAGTATCCTCGA TGAGCTTGACAAAGATGAGAGTACCCATGATTCTGTGTCTCAAGAATCAGAGTCAGAAGA AGATGGGATTCATGTGGATTCACAAAAGGCTCTTGCTCTAAAAGAAAAGGGCAATAAATA CTTCAAACAAGGAAAATATGATGACGCGATTGAATGCTACACCAAAGGCATGGATGCTGA TCCATATAATCCTGTATTGCCAACAAACAGAGCATCAGCATACTTCAGACTGAAAAAATT TGCTGTTGCTGAGTCTGATTGTAATTTAGCACTTGCCTTGAATAGAAGTTATACAAAGGC TTATTTAAGACGGGGTGCGGCTCGATTTGCTTTGCAAAAATTAGAGGATGCCAAAAAAGA TTATGAAAAAGTATTAGAACTGGAACCAAATAACTTTGAAGCTACAAATGAGCTCAGGAA AATTAATCAGGCTTTAACTTCCAAAGAAAACTCCTGTCCAAAGGAATCTGATAAAATGAT TAAGTCAGCTGAAGGAGAGAAAAAACACGTGGAAGAGCAACAGAATAAACAGCAAGCCAT TTCAGAGAAAGATCGGGGGAATGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAATAAAGCAATTGAATTACAACTACAAGTGAAACAAAATGCAGAAGAGCTGCAAGACT TTATGAGGGATTTAGAAAACTGGGGCAAAAGATATTAAACAAAAGGATATGGAACTAAGA AGACAGAATGGTGTTCCTGACAGAGAATTTGCCTCCTATTCGGAATGGGAATTTTAGGAA AAAGAAGAAAGGCAAAGTTAAAGAGTCATCTACAAAAACCAAAGATGAAAACACGAAAAA CAGGATAAAATCTTATGATTATGAGGCATGGGCAAAACTTGATGTGGACAGTATCCTCGA TGAGCTTGACAAAGATGAGAGTACCCATGATTCTGTGTCTCAAGAATCAGAGTCAGAAGA AGATGGGATTCATGTGGATTCACAAAAGGCTCTTGCTCTAAAAGAAAAGGGCAATAAATA CTTCAAACAAGGAAAATATGATGACGCGATTGAATGCTACACCAAAGGCATGGATGCTGA TCCATATAATCCTGTATTGCCAACAAACAGAGCATCAGCATACTTCAGACTGAAAAAATT TGCTGTTGCTGAGTCTGATTGTAATTTAGCACTTGCCTTGAATAGAAGTTATACAAAGGC TTATTTAAGACGGGGTGCGGCTCGATTTGCTTTGCAAAAATTAGAGGATGCCAAAAAAGA TTATGAAAAAGTATTAGAACTGGAACCAAATAACTTTGAAGCTACAAATGAGCTCAGGAA AATTAATCAGGCTTTAACTTCCAAAGAAAACTCCTGTCCAAAGGAATCTGATAAAATGAT TAAGTCAGCTGAAGGAGAGAAAAAACACGTGGAAGAGCAACAGAATAAACAGCAAGCCAT TTCAGAGAAAGATCGGGGGAATGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 131-292, gnl|bosTau2|chr5 (24631448-24631287) | |
| 131-292, gnl|canFam2|chr27 (10072127-10071972) | |
| 131-292, gnl|dasNov1|scaffold_13692 (2954-2798) | |
| 131-292, gnl|fr1|chrUn (191213807-191213973) | |
| 131-292, gnl|galGal2|chr1 (28356993-28357148) | |
| 131-292, gnl|hg17|chr12 (46381502-46381657) | |
| 131-292, gnl|Hg17|chr12 (46381669-46381508) | |
| 131-292, gnl|loxAfr1|scaffold_32383 (21836-21681) | |
| 131-292, gnl|mm7|chr15 (97701631-97701789) | |
| 131-292, gnl|Mm7|chr15 (97701819-97701637) | |
| 131-292, gnl|monDom2|scaffold_262 (81541-81696) | |
| 131-292, gnl|oryCun1|scaffold_94055 (7913-7758) | |
| 131-292, gnl|panTro1|chr10 (47365705-47365860) | |
| 131-292, gnl|rheMac2|chr11 (44769332-44769487) | |
| 131-292, gnl|rn3|chr7 (136490089-136490244) | |
| 131-292, gnl|tetNig1|chrUn_random (55004515-55004688) | |
| 131-292, gnl|xenTro1|scaffold_66 (2703154-2703316) | |
| 538-659, gnl|bosTau2|chr5 (24624301-24624180) | |
| 538-659, gnl|Hg17|chr12 (46370689-46370568) | |
| 538-659, gnl|Mm7|chr15 (97694800-97694679) | |
| 729-857, gnl|bosTau2|chr5 (24620699-24620571) | |
| 729-857, gnl|Hg17|chr12 (46368053-46367925) | |
| 729-857, gnl|Mm7|chr15 (97691887-97691756) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 131-292, gnl|bosTau2|chr5 (24631448-24631287) | |
| 131-292, gnl|canFam2|chr27 (10072127-10071972) | |
| 131-292, gnl|dasNov1|scaffold_13692 (2954-2798) | |
| 131-292, gnl|fr1|chrUn (191213807-191213973) | |
| 131-292, gnl|galGal2|chr1 (28356993-28357148) | |
| 131-292, gnl|hg17|chr12 (46381502-46381657) | |
| 131-292, gnl|Hg17|chr12 (46381669-46381508) | |
| 131-292, gnl|loxAfr1|scaffold_32383 (21836-21681) | |
| 131-292, gnl|mm7|chr15 (97701631-97701789) | |
| 131-292, gnl|Mm7|chr15 (97701819-97701637) | |
| 131-292, gnl|monDom2|scaffold_262 (81541-81696) | |
| 131-292, gnl|oryCun1|scaffold_94055 (7913-7758) | |
| 131-292, gnl|panTro1|chr10 (47365705-47365860) | |
| 131-292, gnl|rheMac2|chr11 (44769332-44769487) | |
| 131-292, gnl|rn3|chr7 (136490089-136490244) | |
| 131-292, gnl|tetNig1|chrUn_random (55004515-55004688) | |
| 131-292, gnl|xenTro1|scaffold_66 (2703154-2703316) | |
| 538-659, gnl|bosTau2|chr5 (24624301-24624180) | |
| 538-659, gnl|Hg17|chr12 (46370689-46370568) | |
| 538-659, gnl|Mm7|chr15 (97694800-97694679) | |
| 729-857, gnl|bosTau2|chr5 (24620699-24620571) | |
| 729-857, gnl|Hg17|chr12 (46368053-46367925) | |
| 729-857, gnl|Mm7|chr15 (97691887-97691756) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| mcp (0.170648) | |
| nmm (0.132802) | |
| sug (0.127291) | |
| eep (0.122564) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) | |
| nmm (0.132802) | |
| sug (0.127291) | |
| eep (0.122564) |