Non-Coding RNA Search

Ss1.1-rsug02_e13.5

Sequence:


               
               TAATCATGGAGATGGCAGCGAGCCCCGTGGCATTTCAGGGCCCCCAGCTAACAGCCATCA
GCAGTGCTGATTGCAGTGTGATAGAGATAGATGATACTCGGGATGACTTGGATGAGGATG
TGATCCTGGTGGAGCCTCAGAACCCTCCACTTACATACACAGGTGCTCCTCCCCACAGAA
TGAGGGCCAGACTGCAGGACCAAATACTGGTCATTGAGTCCCCAAACAGTTCCCAGGCTC
AGTGGCCTTCTACCAGTAGTGGTTCTGCACATAAGAATGATAGTCCTGGGGATATCCGTA
GAGCCAGGAAGAGAAAATATACAGTCTGCTGTTCCTATTGTAGTGAGGAGGGCCATTCAA
AGGAAACCTGTGACAATGAGTGCAACAAGGCCCAGGTATTTGAGAATCTGATCATCACCC
TGCAGTAGCTGACACCTGAAGAGGAGGAGAGGTCAAAAGAGGTCCCTGGTGAACACAACG
ACCTCTTTGAGCCACAGTAATGTGCTAGACCCAGCCCTGAGTGAACCCTTAACTGTATTC
AAAGAGTGATGACAGGAAAAACAGGGGTGGGGTAGAGGAAGCGTCTATAGGCATAAATTA
ATACACAAAGTGGTTTTCTTTTGGGAAGAACAACAACATTGATAGGAGGGCCTAATCTCT
GTCTCTGCTCCTTCCTCCATCTGCCTGAGGGTCTGTTCTCCATGCGTGTGTCTATTTCCT
TGAGGACTTTATTCTTTCTAGGAAAGGAGAATAACTTATTGTTAAACCTTCAAAAAATGA
AAGAAGATACAAAAACTAAAGTACAAATGACCTGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAATCATGGAGATGGCAGCGAGCCCCGTGGCATTTCAGGGCCCCCAGCTAACAGCCATCA
GCAGTGCTGATTGCAGTGTGATAGAGATAGATGATACTCGGGATGACTTGGATGAGGATG
TGATCCTGGTGGAGCCTCAGAACCCTCCACTTACATACACAGGTGCTCCTCCCCACAGAA
TGAGGGCCAGACTGCAGGACCAAATACTGGTCATTGAGTCCCCAAACAGTTCCCAGGCTC
AGTGGCCTTCTACCAGTAGTGGTTCTGCACATAAGAATGATAGTCCTGGGGATATCCGTA
GAGCCAGGAAGAGAAAATATACAGTCTGCTGTTCCTATTGTAGTGAGGAGGGCCATTCAA
AGGAAACCTGTGACAATGAGTGCAACAAGGCCCAGGTATTTGAGAATCTGATCATCACCC
TGCAGTAGCTGACACCTGAAGAGGAGGAGAGGTCAAAAGAGGTCCCTGGTGAACACAACG
ACCTCTTTGAGCCACAGTAATGTGCTAGACCCAGCCCTGAGTGAACCCTTAACTGTATTC
AAAGAGTGATGACAGGAAAAACAGGGGTGGGGTAGAGGAAGCGTCTATAGGCATAAATTA
ATACACAAAGTGGTTTTCTTTTGGGAAGAACAACAACATTGATAGGAGGGCCTAATCTCT
GTCTCTGCTCCTTCCTCCATCTGCCTGAGGGTCTGTTCTCCATGCGTGTGTCTATTTCCT
TGAGGACTTTATTCTTTCTAGGAAAGGAGAATAACTTATTGTTAAACCTTCAAAAAATGA
AAGAAGATACAAAAACTAAAGTACAAATGACCTGAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               7-625, gnl|bosTau2|chrX (924662-924047)
               

               
               7-625, gnl|Hg17|chrX (117741805-117742425)
               

               
               7-625, gnl|Mm7|chrX (30957910-30958521)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-625, gnl|bosTau2|chrX (924662-924047)
               

               
               7-625, gnl|Hg17|chrX (117741805-117742425)
               

               
               7-625, gnl|Mm7|chrX (30957910-30958521)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               sin (0.174948)
               

               
               sug (0.127291)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)
               

               
               sug (0.127291)

	7-625, gnl\|bosTau2\|chrX (924662-924047)
	7-625, gnl\|Hg17\|chrX (117741805-117742425)
	7-625, gnl\|Mm7\|chrX (30957910-30958521)