Non-Coding RNA Search

Ss1.1-rsug04_b19.5

Sequence:


               
               GAACACCAGTGTCTGCCCCTGCAAACTATTTAAGAAGTTCAACCTGGGTCTTATAACCTG
TGATTTAGCAGTTGAGTGACTTTGGAATTCATAAAAATGACATTGACCTGGTTTTCGCAC
ACTTGGTCATGACATAATGGAGTAATTTTAGGGGGTTTCTGGCTGACTTTTATGTCAGGG
ATATGGGTAAACTTTTAAAGCTTTTATCTTTAGAAAATGTTGCAAATGGATTATAAGATG
CCACTTTATAAGACAGTCTATTGAAGGAAAAATCTTTGGTGTGTAACGGAAGTGGTGTGG
CTTTTGATGCTCCTATTTGAAGGCAAGGGAGGGTTGCTTTGAATAAAAATTGATATGTAA
TTGCTGTGATGATTAAGTTGCATGATCACATGGGGCCACCCTGAGGTAGAAAGGACAAAG
GAGTATTGAGGAGCTGGAAAGGGAGCATTCAGGCTGAAACTAAGCCAGAAGATAACTTGG
GTCAATTAAAAGTGTGTTGGCAAAACGGAATGAAAAACATCTGGCTTAGAAGAAACATTA
AAGAATGACATTTGTAAGTAAAAAGTGTGTTTTTGATATTTTTAGGGTAAAGATCAATGC
AAAAGATAGGCTTTTCTATTTCATATGGGTTGTCTTTTTCCTGTTTATATGGGAACTTGT
TTTTATTCAGAGCCAGAGGAAAAGATTTTCAGACTTGGTCTCAACCATCCATGAAATCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACACCAGTGTCTGCCCCTGCAAACTATTTAAGAAGTTCAACCTGGGTCTTATAACCTG
TGATTTAGCAGTTGAGTGACTTTGGAATTCATAAAAATGACATTGACCTGGTTTTCGCAC
ACTTGGTCATGACATAATGGAGTAATTTTAGGGGGTTTCTGGCTGACTTTTATGTCAGGG
ATATGGGTAAACTTTTAAAGCTTTTATCTTTAGAAAATGTTGCAAATGGATTATAAGATG
CCACTTTATAAGACAGTCTATTGAAGGAAAAATCTTTGGTGTGTAACGGAAGTGGTGTGG
CTTTTGATGCTCCTATTTGAAGGCAAGGGAGGGTTGCTTTGAATAAAAATTGATATGTAA
TTGCTGTGATGATTAAGTTGCATGATCACATGGGGCCACCCTGAGGTAGAAAGGACAAAG
GAGTATTGAGGAGCTGGAAAGGGAGCATTCAGGCTGAAACTAAGCCAGAAGATAACTTGG
GTCAATTAAAAGTGTGTTGGCAAAACGGAATGAAAAACATCTGGCTTAGAAGAAACATTA
AAGAATGACATTTGTAAGTAAAAAGTGTGTTTTTGATATTTTTAGGGTAAAGATCAATGC
AAAAGATAGGCTTTTCTATTTCATATGGGTTGTCTTTTTCCTGTTTATATGGGAACTTGT
TTTTATTCAGAGCCAGAGGAAAAGATTTTCAGACTTGGTCTCAACCATCCATGAAATCCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               5-720, gnl|bosTau2|chr18 (13763859-13763119)
               

               
               5-720, gnl|Hg17|chr16 (68055535-68056241)
               

               
               5-720, gnl|Mm7|chr8 (105785442-105786248)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-720, gnl|bosTau2|chr18 (13763859-13763119)
               

               
               5-720, gnl|Hg17|chr16 (68055535-68056241)
               

               
               5-720, gnl|Mm7|chr8 (105785442-105786248)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               sug (0.254582)
               

               
               hyp (0.142837)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sug (0.254582)
               

               
               hyp (0.142837)

	5-720, gnl\|bosTau2\|chr18 (13763859-13763119)
	5-720, gnl\|Hg17\|chr16 (68055535-68056241)
	5-720, gnl\|Mm7\|chr8 (105785442-105786248)