Non-Coding RNA Search

Ss1.1-rsug06_k3.5

Sequence:


               
               GAAATAACATTTTGAAACAGCTTTAAAACAAAGAAAAATTGAGTAACTCGGCTGTTGTTC
ATAGGACATAATTTACAGGAAATTTTGAGAGTTCTTGCCAGTTTTGTAACAAAGAGACCA
ATAATCCTTAACGAAAACTTTGTAAGTTATTTTAGATTTTTAAGGAACATAATGCTGGTC
CCTCTTTTTTCTTTTTCTTTTTTTTTGGTCATTCAGATTGATTTCAATGTGGAATGTTTT
GTAACCAAACCCTTAATTTTTATGTTAAGTGTTTGCCCTGCTTCAGAGTTAAAAAGCCGA
GTTATAAAATCCTTAATTACATCTCAGTTGGTATCAACAGTAGACTTGAAGGAGAGGTAT
TGACTGTCACTAACCTCTGTCGCCCTAGTGAGTAAAGCAATGCCACTCATGGCATAGATT
TATAACAGGCCTGAGGCCAAAACTTATTGTGCTAAGGGATTTATTTATTTACATTAACGA
AATTCAAACTCTGTAGTCTTGAACCCCAGTTCTCAGATGATTAATTATAGATTATTTAAT
TGTATTAGGGAATTGTCATGTTATATTTACTTTTGGATAAAACCTACATTAGATGCATAA
TTCAGTAAGTTTTTTAAAAATGTTAATTGGTCCTTGTTTAGAAGTTAAGCACCTTATCAA
GATATTAATTTAAGTTTTAAAACCTTGTTTTATAACTTTGTAACTCAAGAGTAATGGATG
CTGTAGTAATGTCTCTCACATATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAATAACATTTTGAAACAGCTTTAAAACAAAGAAAAATTGAGTAACTCGGCTGTTGTTC
ATAGGACATAATTTACAGGAAATTTTGAGAGTTCTTGCCAGTTTTGTAACAAAGAGACCA
ATAATCCTTAACGAAAACTTTGTAAGTTATTTTAGATTTTTAAGGAACATAATGCTGGTC
CCTCTTTTTTCTTTTTCTTTTTTTTTGGTCATTCAGATTGATTTCAATGTGGAATGTTTT
GTAACCAAACCCTTAATTTTTATGTTAAGTGTTTGCCCTGCTTCAGAGTTAAAAAGCCGA
GTTATAAAATCCTTAATTACATCTCAGTTGGTATCAACAGTAGACTTGAAGGAGAGGTAT
TGACTGTCACTAACCTCTGTCGCCCTAGTGAGTAAAGCAATGCCACTCATGGCATAGATT
TATAACAGGCCTGAGGCCAAAACTTATTGTGCTAAGGGATTTATTTATTTACATTAACGA
AATTCAAACTCTGTAGTCTTGAACCCCAGTTCTCAGATGATTAATTATAGATTATTTAAT
TGTATTAGGGAATTGTCATGTTATATTTACTTTTGGATAAAACCTACATTAGATGCATAA
TTCAGTAAGTTTTTTAAAAATGTTAATTGGTCCTTGTTTAGAAGTTAAGCACCTTATCAA
GATATTAATTTAAGTTTTAAAACCTTGTTTTATAACTTTGTAACTCAAGAGTAATGGATG
CTGTAGTAATGTCTCTCACATATG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               2-744, gnl|bosTau2|chr14 (4411573-4412279)
               

               
               2-744, gnl|Hg17|chr8 (133893863-133894587)
               

               
               2-744, gnl|Mm7|chr15 (66694433-66695126)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-744, gnl|bosTau2|chr14 (4411573-4412279)
               

               
               2-744, gnl|Hg17|chr8 (133893863-133894587)
               

               
               2-744, gnl|Mm7|chr15 (66694433-66695126)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sug (0.254582)
               

               
               gul (0.177588)
               

               
               fco (0.157208)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sug (0.254582)
               

               
               gul (0.177588)
               

               
               fco (0.157208)

	2-744, gnl\|bosTau2\|chr14 (4411573-4412279)
	2-744, gnl\|Hg17\|chr8 (133893863-133894587)
	2-744, gnl\|Mm7\|chr15 (66694433-66695126)