Ss1.1-rsug09_d23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCGCCTGGTGGTTCTGATCGGGTCCCTGGGAGCCCGGCTGCATGAGCTGAAGCAGAAGG TGGTGGCAGAGAACCCACAGCATTTTGGTGTTGCTGTTCCACATACCACCAGGCCCCGGA AGAGCCACGAGAAGGAGGGGGTAGAATATCACTTCATCTCGAAGCAAGCGTTCGAGGCCG ACTTGCATCACAACAAGTTCCTGGAGCACGGTGAATATAAGGAAAACCTCTACGGAACCA GCCTGGAAGCCATTCAGGTTGTGATGGCCAAAAACAAAGTTTGTTTGGTGGACGTGGAGC CGGATGCACTGCAACACCTGAGGACCTCAGAGTTTAAACCGTATGTTATATTTGTAAAGC CTGCAATTCAGGAAAAACGGAAGACGCCACCCACGTCCCCAGCTTGTGAGGATGCAGCAG CCCCACTTGATGCGGAGCAGCAAGAGATGGCCGCTTCCGCTGCCTTCATAGATCAGCATT ACGGGCACTGGGTGGATGCCGTGCTGGTGAAGGAGGACCTCCAGACTGCACACAGCCAGC TCAGAGCGCTCTTAGAGAAGCTGAGCAAGGACACTCACTGGGTACCTATTAGTTGGGTCA GGTAACTGCATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCGCCTGGTGGTTCTGATCGGGTCCCTGGGAGCCCGGCTGCATGAGCTGAAGCAGAAGG TGGTGGCAGAGAACCCACAGCATTTTGGTGTTGCTGTTCCACATACCACCAGGCCCCGGA AGAGCCACGAGAAGGAGGGGGTAGAATATCACTTCATCTCGAAGCAAGCGTTCGAGGCCG ACTTGCATCACAACAAGTTCCTGGAGCACGGTGAATATAAGGAAAACCTCTACGGAACCA GCCTGGAAGCCATTCAGGTTGTGATGGCCAAAAACAAAGTTTGTTTGGTGGACGTGGAGC CGGATGCACTGCAACACCTGAGGACCTCAGAGTTTAAACCGTATGTTATATTTGTAAAGC CTGCAATTCAGGAAAAACGGAAGACGCCACCCACGTCCCCAGCTTGTGAGGATGCAGCAG CCCCACTTGATGCGGAGCAGCAAGAGATGGCCGCTTCCGCTGCCTTCATAGATCAGCATT ACGGGCACTGGGTGGATGCCGTGCTGGTGAAGGAGGACCTCCAGACTGCACACAGCCAGC TCAGAGCGCTCTTAGAGAAGCTGAGCAAGGACACTCACTGGGTACCTATTAGTTGGGTCA GGTAACTGCATC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 5-105, gnl|bosTau2|chr19 (38423508-38423606) | |
| 5-105, gnl|canFam2|chr9 (22815386-22815296) | |
| 5-105, gnl|danRer3|chr3 (35300747-35300657) | |
| 5-105, gnl|dasNov1|scaffold_33684 (3924-3834) | |
| 5-105, gnl|echTel1|scaffold_309003 (7052-6962) | |
| 5-105, gnl|fr1|chrUn (279298017-279298107) | |
| 5-105, gnl|galGal2|chrUn (45715079-45714989) | |
| 5-105, gnl|hg17|chr17 (39246903-39246993) | |
| 5-105, gnl|Hg17|chr17 (39247000-39246902) | |
| 5-105, gnl|loxAfr1|scaffold_2421 (101411-101321) | |
| 5-105, gnl|mm7|chr11 (102117393-102117481) | |
| 5-105, gnl|Mm7|chr11 (102117488-102117392) | |
| 5-105, gnl|monDom2|scaffold_18 (54327062-54327154) | |
| 5-105, gnl|oryCun1|scaffold_139225 (1932-2025) | |
| 5-105, gnl|panTro1|chr19 (42432165-42432255) | |
| 5-105, gnl|rheMac2|chr16 (53841679-53841769) | |
| 5-105, gnl|rn3|chr10 (91080514-91080602) | |
| 5-105, gnl|tetNig1|chr2 (5658810-5658900) | |
| 197-306, gnl|bosTau2|chr19 (38425462-38425571) | |
| 197-306, gnl|canFam2|chr9 (22818297-22818211) | |
| 197-306, gnl|danRer3|chr3 (35302620-35302534) | |
| 197-306, gnl|dasNov1|scaffold_33684 (6636-6550) | |
| 197-306, gnl|echTel1|scaffold_185987 (12170-12256) | |
| 197-306, gnl|fr1|chrUn (279297675-279297760) | |
| 197-306, gnl|galGal2|chrUn (45716867-45716781) | |
| 197-306, gnl|hg17|chr17 (39243695-39243781) | |
| 197-306, gnl|Hg17|chr17 (39243809-39243700) | |
| 197-306, gnl|loxAfr1|scaffold_2421 (104634-104548) | |
| 197-306, gnl|mm7|chr11 (102114023-102114109) | |
| 197-306, gnl|Mm7|chr11 (102114137-102114028) | |
| 197-306, gnl|monDom2|scaffold_18 (54321191-54321277) | |
| 197-306, gnl|oryCun1|scaffold_207021 (14904-14989) | |
| 197-306, gnl|panTro1|chr19 (42428646-42428732) | |
| 197-306, gnl|rheMac2|chr16 (53838472-53838558) | |
| 197-306, gnl|rn3|chr10 (91076720-91076806) | |
| 197-306, gnl|tetNig1|chr2 (5658238-5658324) | |
| 429-612, gnl|bosTau2|chr19 (38429421-38429604) | |
| 429-612, gnl|Hg17|chr17 (39234771-39234588) | |
| 429-612, gnl|Mm7|chr11 (102109768-102109585) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-105, gnl|bosTau2|chr19 (38423508-38423606) | |
| 5-105, gnl|canFam2|chr9 (22815386-22815296) | |
| 5-105, gnl|danRer3|chr3 (35300747-35300657) | |
| 5-105, gnl|dasNov1|scaffold_33684 (3924-3834) | |
| 5-105, gnl|echTel1|scaffold_309003 (7052-6962) | |
| 5-105, gnl|fr1|chrUn (279298017-279298107) | |
| 5-105, gnl|galGal2|chrUn (45715079-45714989) | |
| 5-105, gnl|hg17|chr17 (39246903-39246993) | |
| 5-105, gnl|Hg17|chr17 (39247000-39246902) | |
| 5-105, gnl|loxAfr1|scaffold_2421 (101411-101321) | |
| 5-105, gnl|mm7|chr11 (102117393-102117481) | |
| 5-105, gnl|Mm7|chr11 (102117488-102117392) | |
| 5-105, gnl|monDom2|scaffold_18 (54327062-54327154) | |
| 5-105, gnl|oryCun1|scaffold_139225 (1932-2025) | |
| 5-105, gnl|panTro1|chr19 (42432165-42432255) | |
| 5-105, gnl|rheMac2|chr16 (53841679-53841769) | |
| 5-105, gnl|rn3|chr10 (91080514-91080602) | |
| 5-105, gnl|tetNig1|chr2 (5658810-5658900) | |
| 197-306, gnl|bosTau2|chr19 (38425462-38425571) | |
| 197-306, gnl|canFam2|chr9 (22818297-22818211) | |
| 197-306, gnl|danRer3|chr3 (35302620-35302534) | |
| 197-306, gnl|dasNov1|scaffold_33684 (6636-6550) | |
| 197-306, gnl|echTel1|scaffold_185987 (12170-12256) | |
| 197-306, gnl|fr1|chrUn (279297675-279297760) | |
| 197-306, gnl|galGal2|chrUn (45716867-45716781) | |
| 197-306, gnl|hg17|chr17 (39243695-39243781) | |
| 197-306, gnl|Hg17|chr17 (39243809-39243700) | |
| 197-306, gnl|loxAfr1|scaffold_2421 (104634-104548) | |
| 197-306, gnl|mm7|chr11 (102114023-102114109) | |
| 197-306, gnl|Mm7|chr11 (102114137-102114028) | |
| 197-306, gnl|monDom2|scaffold_18 (54321191-54321277) | |
| 197-306, gnl|oryCun1|scaffold_207021 (14904-14989) | |
| 197-306, gnl|panTro1|chr19 (42428646-42428732) | |
| 197-306, gnl|rheMac2|chr16 (53838472-53838558) | |
| 197-306, gnl|rn3|chr10 (91076720-91076806) | |
| 197-306, gnl|tetNig1|chr2 (5658238-5658324) | |
| 429-612, gnl|bosTau2|chr19 (38429421-38429604) | |
| 429-612, gnl|Hg17|chr17 (39234771-39234588) | |
| 429-612, gnl|Mm7|chr11 (102109768-102109585) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hlv (0.139256) | |
| sug (0.127291) |