Ss1.1-rsug10_h4.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCTGGCAGAGTTCAAGCCGCTGTGGATTGAAGAACCCACTTGCCCTGATGACATCCTAG GACACGCTGCCATCTCCAAGGCACTGGCCCCGCTGGGAATTGGCGTAGCCACGGGAGAAC AGTGCCACAACAGAGTGATATTTAAGCAACTCCTACAGGCGAAAGCCCTGCAGTTTCTTC AGATCGACAGCTGCAGGCTGGGGAGTGTCAACGAGAACCTCTCCGTGTTGCTGATGGCCA AAAAGTTTGGAGTTCCTGTGTGCCCACATGCTGGTGGAGTTGGCCTCTGTGAACTGGTGC AACACCTGATCATATTTGACTTCATATCAGTCTCTGCAAGCCTCAAAGACAGGATGTGTG AGTATGTTGACCACCTGCACGAGCACTTCAAGTACCCTGTGGTGATCAGGAAGGCTTGCT ACATGCCTCCTAAGGATGCTGGTTATTCAACAGAAATGAAGGAGGAATCTGTACGGCAAC ACCAGTACCCAGATGGAGAAGTCTGGAAGGAGCTCCTGGCTGCTCAAGGGAATTAAGCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCTGGCAGAGTTCAAGCCGCTGTGGATTGAAGAACCCACTTGCCCTGATGACATCCTAG GACACGCTGCCATCTCCAAGGCACTGGCCCCGCTGGGAATTGGCGTAGCCACGGGAGAAC AGTGCCACAACAGAGTGATATTTAAGCAACTCCTACAGGCGAAAGCCCTGCAGTTTCTTC AGATCGACAGCTGCAGGCTGGGGAGTGTCAACGAGAACCTCTCCGTGTTGCTGATGGCCA AAAAGTTTGGAGTTCCTGTGTGCCCACATGCTGGTGGAGTTGGCCTCTGTGAACTGGTGC AACACCTGATCATATTTGACTTCATATCAGTCTCTGCAAGCCTCAAAGACAGGATGTGTG AGTATGTTGACCACCTGCACGAGCACTTCAAGTACCCTGTGGTGATCAGGAAGGCTTGCT ACATGCCTCCTAAGGATGCTGGTTATTCAACAGAAATGAAGGAGGAATCTGTACGGCAAC ACCAGTACCCAGATGGAGAAGTCTGGAAGGAGCTCCTGGCTGCTCAAGGGAATTAAGCAT |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 120-249, gnl|bosTau2|chr24 (25996299-25996170) | |
| 120-249, gnl|canFam2|chr7 (70543329-70543498) | |
| 120-249, gnl|danRer3|chr3 (3545087-3545232) | |
| 120-249, gnl|dasNov1|scaffold_8370 (52611-52441) | |
| 120-249, gnl|echTel1|scaffold_222044 (3937-4103) | |
| 120-249, gnl|fr1|chrUn (2993937-2994088) | |
| 120-249, gnl|galGal2|chr2 (101148281-101148113) | |
| 120-249, gnl|hg17|chr18 (667737-667907) | |
| 120-249, gnl|Hg17|chr18 (667875-667746) | |
| 120-249, gnl|loxAfr1|scaffold_13143 (21236-21066) | |
| 120-249, gnl|monDom2|scaffold_21 (34805172-34805001) | |
| 120-249, gnl|oryCun1|scaffold_205623 (92255-92425) | |
| 120-249, gnl|panTro1|chr17 (12136686-12136516) | |
| 120-249, gnl|rheMac2|chr18 (13426601-13426431) | |
| 120-249, gnl|rn3|chr9 (112809390-112809213) | |
| 120-249, gnl|tetNig1|chr6 (4450940-4451099) | |
| 120-249, gnl|xenTro1|scaffold_549 (831684-831838) | |
| 251-353, gnl|bosTau2|chr24 (25995925-25995823) | |
| 251-353, gnl|canFam2|chr7 (70542999-70543111) | |
| 251-353, gnl|danRer3|chr3 (3543979-3544095) | |
| 251-353, gnl|dasNov1|scaffold_8370 (52993-52877) | |
| 251-353, gnl|echTel1|scaffold_222044 (3501-3617) | |
| 251-353, gnl|fr1|chrUn (2993582-2993694) | |
| 251-353, gnl|galGal2|chr2 (101148723-101148610) | |
| 251-353, gnl|hg17|chr18 (667340-667456) | |
| 251-353, gnl|Hg17|chr18 (667446-667344) | |
| 251-353, gnl|loxAfr1|scaffold_13143 (21748-21632) | |
| 251-353, gnl|monDom2|scaffold_21 (34805792-34805673) | |
| 251-353, gnl|oryCun1|scaffold_205623 (91875-91991) | |
| 251-353, gnl|panTro1|chr17 (12137083-12136967) | |
| 251-353, gnl|rheMac2|chr18 (13426995-13426879) | |
| 251-353, gnl|rn3|chr9 (112809730-112809614) | |
| 251-353, gnl|tetNig1|chr6 (4450720-4450832) | |
| 251-353, gnl|xenTro1|scaffold_549 (828872-828987) | |
| 433-539, gnl|bosTau2|chr24 (25994244-25994138) | |
| 433-539, gnl|Hg17|chr18 (664408-664302) | |
| 433-539, gnl|Mm7|chr5 (56832580-56832478) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 120-249, gnl|bosTau2|chr24 (25996299-25996170) | |
| 120-249, gnl|canFam2|chr7 (70543329-70543498) | |
| 120-249, gnl|danRer3|chr3 (3545087-3545232) | |
| 120-249, gnl|dasNov1|scaffold_8370 (52611-52441) | |
| 120-249, gnl|echTel1|scaffold_222044 (3937-4103) | |
| 120-249, gnl|fr1|chrUn (2993937-2994088) | |
| 120-249, gnl|galGal2|chr2 (101148281-101148113) | |
| 120-249, gnl|hg17|chr18 (667737-667907) | |
| 120-249, gnl|Hg17|chr18 (667875-667746) | |
| 120-249, gnl|loxAfr1|scaffold_13143 (21236-21066) | |
| 120-249, gnl|monDom2|scaffold_21 (34805172-34805001) | |
| 120-249, gnl|oryCun1|scaffold_205623 (92255-92425) | |
| 120-249, gnl|panTro1|chr17 (12136686-12136516) | |
| 120-249, gnl|rheMac2|chr18 (13426601-13426431) | |
| 120-249, gnl|rn3|chr9 (112809390-112809213) | |
| 120-249, gnl|tetNig1|chr6 (4450940-4451099) | |
| 120-249, gnl|xenTro1|scaffold_549 (831684-831838) | |
| 251-353, gnl|bosTau2|chr24 (25995925-25995823) | |
| 251-353, gnl|canFam2|chr7 (70542999-70543111) | |
| 251-353, gnl|danRer3|chr3 (3543979-3544095) | |
| 251-353, gnl|dasNov1|scaffold_8370 (52993-52877) | |
| 251-353, gnl|echTel1|scaffold_222044 (3501-3617) | |
| 251-353, gnl|fr1|chrUn (2993582-2993694) | |
| 251-353, gnl|galGal2|chr2 (101148723-101148610) | |
| 251-353, gnl|hg17|chr18 (667340-667456) | |
| 251-353, gnl|Hg17|chr18 (667446-667344) | |
| 251-353, gnl|loxAfr1|scaffold_13143 (21748-21632) | |
| 251-353, gnl|monDom2|scaffold_21 (34805792-34805673) | |
| 251-353, gnl|oryCun1|scaffold_205623 (91875-91991) | |
| 251-353, gnl|panTro1|chr17 (12137083-12136967) | |
| 251-353, gnl|rheMac2|chr18 (13426995-13426879) | |
| 251-353, gnl|rn3|chr9 (112809730-112809614) | |
| 251-353, gnl|tetNig1|chr6 (4450720-4450832) | |
| 251-353, gnl|xenTro1|scaffold_549 (828872-828987) | |
| 433-539, gnl|bosTau2|chr24 (25994244-25994138) | |
| 433-539, gnl|Hg17|chr18 (664408-664302) | |
| 433-539, gnl|Mm7|chr5 (56832580-56832478) |
| Expressed library(ies): 9 entry(ies) | More info |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
| sto (0.539471) | |
| lun (0.300978) | |
| sug (0.254582) | |
| sin (0.174948) | |
| cut (0.169924) | |
| cki (0.165235) | |
| cli (0.152812) | |
| spl (0.143184) | |
| ste (0.135208) |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sto (0.539471) | |
| lun (0.300978) | |
| sug (0.254582) | |
| sin (0.174948) | |
| cut (0.169924) | |
| cki (0.165235) | |
| cli (0.152812) | |
| spl (0.143184) | |
| ste (0.135208) |