Ss1.1-rsug10_j20.5
|
TGGGGATGCTAGTGCGGGGGCCCGAATGTCCTTGCCTCTGTCTCTCAGAATTGGTTTTGG
GTTTTGTTTTGTTTTGTTTTGTTTTCTTTTTTTTTTGTTATTGTTGTTTGGTTTTGGTTT
CTAAATGACTTATATTTGTAAAGACAGGAAAGTGGTGGGGACAAAGTTTATATATACTGT
GTTTAGTTCTTATGTGACCACTTGAGCAGAAGCAAAAATGCATTGGAACCTATCATTTGA
GCCTGTGAAGTTCTTTGAGCAGTTGTCATGAGGCCCATGTTGGGAAATAAGAACATTGTT
GAGTGTACACTCATTCAGTTCCCATGGGGAGCAATGAAAAAAATGCTTTACAGGCCAGCT
ATGTCATTACTTATGTCGTATCTCATGCTTAAAATCTCAAGCGATATCTCTCTGATTAAA
TTCCAATTTAGAAATGTACACCATTAATACTCATTACTTCCGAGGGAGAAATGGATTCAG
ACCTGTCGCAACAGGAGGTTAACACTTTTTTTTTTTTAACCATCCTATTCTTTTGCCAAA
TATCACAAAAGTAATGGGGAAGTTAGTCCCGTTTGGCTGTTGTGCTCTGAAAAAGCTGGG
TTTGGAACTTGTGGGAGTGCTCCCAGCGGGAGGTTCCAAGAAGCAGAGAGGTTGTCAAGT
TACCCACCCTACATCCAGCCTGTCACTCGAGAATTTTCAGAGCTGCACGTTGCCTGCACC
TTTTTTCTACATTGGCTATTTTGGCAAAACATTACTATGATTATCCCCCCCCACTTTTTT
TAACTTCACCCTCAACTATGAGCAAGTAATATTAACATTCCTTTTGTGTATTCAATAATG
GAGTTTGTTTACCTATTTTATTTCAGCATATTTTGAACAAAGATCTTTGTCTCTTTCTGC
TGGAATGTGCACACAGTGAATGTTTGTTAGAACGACACACAATAAAGATACTGTTTTCCT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGGGGATGCTAGTGCGGGGGCCCGAATGTCCTTGCCTCTGTCTCTCAGAATTGGTTTTGG
GTTTTGTTTTGTTTTGTTTTGTTTTCTTTTTTTTTTGTTATTGTTGTTTGGTTTTGGTTT
CTAAATGACTTATATTTGTAAAGACAGGAAAGTGGTGGGGACAAAGTTTATATATACTGT
GTTTAGTTCTTATGTGACCACTTGAGCAGAAGCAAAAATGCATTGGAACCTATCATTTGA
GCCTGTGAAGTTCTTTGAGCAGTTGTCATGAGGCCCATGTTGGGAAATAAGAACATTGTT
GAGTGTACACTCATTCAGTTCCCATGGGGAGCAATGAAAAAAATGCTTTACAGGCCAGCT
ATGTCATTACTTATGTCGTATCTCATGCTTAAAATCTCAAGCGATATCTCTCTGATTAAA
TTCCAATTTAGAAATGTACACCATTAATACTCATTACTTCCGAGGGAGAAATGGATTCAG
ACCTGTCGCAACAGGAGGTTAACACTTTTTTTTTTTTAACCATCCTATTCTTTTGCCAAA
TATCACAAAAGTAATGGGGAAGTTAGTCCCGTTTGGCTGTTGTGCTCTGAAAAAGCTGGG
TTTGGAACTTGTGGGAGTGCTCCCAGCGGGAGGTTCCAAGAAGCAGAGAGGTTGTCAAGT
TACCCACCCTACATCCAGCCTGTCACTCGAGAATTTTCAGAGCTGCACGTTGCCTGCACC
TTTTTTCTACATTGGCTATTTTGGCAAAACATTACTATGATTATCCCCCCCCACTTTTTT
TAACTTCACCCTCAACTATGAGCAAGTAATATTAACATTCCTTTTGTGTATTCAATAATG
GAGTTTGTTTACCTATTTTATTTCAGCATATTTTGAACAAAGATCTTTGTCTCTTTCTGC
TGGAATGTGCACACAGTGAATGTTTGTTAGAACGACACACAATAAAGATACTGTTTTCCT |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
108-959, gnl|bosTau2|chr18 (13762635-13761786) |
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108-959, gnl|canFam2|chr5 (83211195-83210353) |
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108-959, gnl|dasNov1|scaffold_108493 (3926-4711) |
|
108-959, gnl|echTel1|scaffold_289642 (48675-47886) |
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108-959, gnl|hg17|chr16 (68056689-68057566) |
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108-959, gnl|Hg17|chr16 (68056803-68057664) |
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108-959, gnl|mm7|chr8 (105786768-105787498) |
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108-959, gnl|Mm7|chr8 (105786824-105787594) |
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108-959, gnl|monDom2|scaffold_23 (4748046-4747215) |
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108-959, gnl|oryCun1|scaffold_208990 (58705-57912) |
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108-959, gnl|panTro1|chr18 (62399767-62400648) |
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108-959, gnl|rheMac2|chr20 (67847142-67848024) |
|
108-959, gnl|rn3|chr19 (37056304-37057012) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
108-959, gnl|bosTau2|chr18 (13762635-13761786) |
|
108-959, gnl|canFam2|chr5 (83211195-83210353) |
|
108-959, gnl|dasNov1|scaffold_108493 (3926-4711) |
|
108-959, gnl|echTel1|scaffold_289642 (48675-47886) |
|
108-959, gnl|hg17|chr16 (68056689-68057566) |
|
108-959, gnl|Hg17|chr16 (68056803-68057664) |
|
108-959, gnl|mm7|chr8 (105786768-105787498) |
|
108-959, gnl|Mm7|chr8 (105786824-105787594) |
|
108-959, gnl|monDom2|scaffold_23 (4748046-4747215) |
|
108-959, gnl|oryCun1|scaffold_208990 (58705-57912) |
|
108-959, gnl|panTro1|chr18 (62399767-62400648) |
|
108-959, gnl|rheMac2|chr20 (67847142-67848024) |
|
108-959, gnl|rn3|chr19 (37056304-37057012) |
|
sug (1.14562) |
|
bla (0.248694) |
|
spc (0.226732) |
|
col (0.195008) |
|
eye (0.170503) |
|
fhi (0.169578) |
|
lun (0.150489) |
|
spl (0.143184) |
|
kid (0.129735) |
|
ova (0.129132) |
|
thg (0.126791) |
|
ecc (0.115035) |
|
sug (1.14562) |
|
bla (0.248694) |
|
spc (0.226732) |
|
col (0.195008) |
|
eye (0.170503) |
|
fhi (0.169578) |
|
lun (0.150489) |
|
spl (0.143184) |
|
kid (0.129735) |
|
ova (0.129132) |
|
thg (0.126791) |
|
ecc (0.115035) |
