Non-Coding RNA Search

Ss1.1-rsug11_j23.5

Sequence:


               
               CCACGCGTCCGGTTATCTCCTATAGGATGGACCATGCTTTTCAGGACAAGGGTGAATGTG
CTTTTTAGGCTTAATTTTTGTCCTAACAAATAAGAACTCATTTTTTTCCTTTGGTATAGT
CAGAGTTCCTGAAGTACAATCAAACCTTTATTAACTGGAATAACTTAAAGAATAAGCTAA
AAATTGAATTTAGTTCAACAAGGACAAAGCAACACATATTTTAAATCCTTATTTATTGTA
GAGTATTAGTATATCATCCTAAAAAGTATATGTAAAATATGGTTTAATTTTAGACGATTT
GGGATCTTGCAATGCCTTACCGTTGTCATTCTGGCATAAATTCCCATGACAAGGTATTCA
AGTTGATACCGGAAGCTGAGCTGACTATACGCTAATCTTAAGCATTTATGGAAAACTGCT
TTGTTGAATAAAATCTGATCGGAGTTCTTATGGTTACTTTCCCCATACTGCCAAAAGTAG
ATTGCAATAAAACCCCAATAAAAGTTTGGTTGGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACGCGTCCGGTTATCTCCTATAGGATGGACCATGCTTTTCAGGACAAGGGTGAATGTG
CTTTTTAGGCTTAATTTTTGTCCTAACAAATAAGAACTCATTTTTTTCCTTTGGTATAGT
CAGAGTTCCTGAAGTACAATCAAACCTTTATTAACTGGAATAACTTAAAGAATAAGCTAA
AAATTGAATTTAGTTCAACAAGGACAAAGCAACACATATTTTAAATCCTTATTTATTGTA
GAGTATTAGTATATCATCCTAAAAAGTATATGTAAAATATGGTTTAATTTTAGACGATTT
GGGATCTTGCAATGCCTTACCGTTGTCATTCTGGCATAAATTCCCATGACAAGGTATTCA
AGTTGATACCGGAAGCTGAGCTGACTATACGCTAATCTTAAGCATTTATGGAAAACTGCT
TTGTTGAATAAAATCTGATCGGAGTTCTTATGGTTACTTTCCCCATACTGCCAAAAGTAG
ATTGCAATAAAACCCCAATAAAAGTTTGGTTGGATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               13-516, gnl|bosTau2|chr5 (28312112-28311616)
               

               
               13-516, gnl|Hg17|chr12 (68259339-68259829)
               

               
               13-516, gnl|Mm7|chr10 (116577802-116577314)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-516, gnl|bosTau2|chr5 (28312112-28311616)
               

               
               13-516, gnl|Hg17|chr12 (68259339-68259829)
               

               
               13-516, gnl|Mm7|chr10 (116577802-116577314)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lyg (0.133103)
               

               
               sug (0.127291)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.133103)
               

               
               sug (0.127291)

	13-516, gnl\|bosTau2\|chr5 (28312112-28311616)
	13-516, gnl\|Hg17\|chr12 (68259339-68259829)
	13-516, gnl\|Mm7\|chr10 (116577802-116577314)