Non-Coding RNA Search

Ss1.1-rsug12_i14.5

Sequence:


               
               CGCCTCTTCGGAATCGGCACGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCT
CTCTCTCTCTCTCTAGAAAATTTACCTTTATCCTTATCCAATGGTTCCTGGGAAAGAATA
GTGCACAGTACCGGGTTTTTCCACACCCCAGTTTCTTGAGCTAGAGTAGCTAAAAAATGC
AATTCACAGCTGCCATTCTCCATCAGCTTTTCATGAGCTACCTATAAATATTAAATAAAC
ATCCAAAGAATTACAACAGATTTTTAAAAGCAAGCTTATCAGGCTTTAAATATAATACTA
AACTTTTGAAAAATAAGACTTTTATTTTAAAATTTTCATGTCACATTACAAAGTGCTGAA
TCCTTCTAATTTTTAAAGATGATTCTCAAGGATAAGAATTATATTAATTATAAATTTTAA
ATAAATACAATGTATTTCTAGAAATAAGTCTATGTTATTTTTTCCACAAAAAAAGTAAAC
CAAGAGCAAAGTTATTTCTCAAGGAAGCTATCAGAGTATCCATAGCATGGAATACCTTAC
ACATTTCTTATCCTCTGTGTTAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCCTCTTCGGAATCGGCACGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCT
CTCTCTCTCTCTCTAGAAAATTTACCTTTATCCTTATCCAATGGTTCCTGGGAAAGAATA
GTGCACAGTACCGGGTTTTTCCACACCCCAGTTTCTTGAGCTAGAGTAGCTAAAAAATGC
AATTCACAGCTGCCATTCTCCATCAGCTTTTCATGAGCTACCTATAAATATTAAATAAAC
ATCCAAAGAATTACAACAGATTTTTAAAAGCAAGCTTATCAGGCTTTAAATATAATACTA
AACTTTTGAAAAATAAGACTTTTATTTTAAAATTTTCATGTCACATTACAAAGTGCTGAA
TCCTTCTAATTTTTAAAGATGATTCTCAAGGATAAGAATTATATTAATTATAAATTTTAA
ATAAATACAATGTATTTCTAGAAATAAGTCTATGTTATTTTTTCCACAAAAAAAGTAAAC
CAAGAGCAAAGTTATTTCTCAAGGAAGCTATCAGAGTATCCATAGCATGGAATACCTTAC
ACATTTCTTATCCTCTGTGTTAGT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               22-558, gnl|bosTau2|chr9 (35034749-35035279)
               

               
               22-558, gnl|Hg17|chr6 (87985225-87984700)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               22-558, gnl|bosTau2|chr9 (35034749-35035279)
               

               
               22-558, gnl|Hg17|chr6 (87985225-87984700)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               rec (0.17307)
               

               
               sug (0.127291)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)
               

               
               sug (0.127291)

	22-558, gnl\|bosTau2\|chr9 (35034749-35035279)
	22-558, gnl\|Hg17\|chr6 (87985225-87984700)